Literature DB >> 20687832

Role of small RNAs in host-microbe interactions.

Surekha Katiyar-Agarwal1, Hailing Jin.   

Abstract

Plant defense responses against pathogens are mediated by activation and repression of a large array of genes. Host endogenous small RNAs are essential in this gene expression reprogramming process. Here, we discuss recent findings on pathogen-regulated host microRNAs (miRNAs) and small interfering RNAs (siRNAs) and their roles in plant-microbe interaction. We further introduce small RNA pathway components, including Dicer-like proteins (DCLs), double-stranded RNA (dsRNA) binding protein, RNA-dependent RNA polymerases (RDRs), small RNA methyltransferase HEN1, and Argonaute (AGO) proteins, that contribute to plant immune responses. The strategies that pathogens have evolved to suppress host small RNA pathways are also discussed. Collectively, host small RNAs and RNA silencing machinery constitute a critical layer of defense in regulating the interaction of pathogens with plants.

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Year:  2010        PMID: 20687832      PMCID: PMC3752435          DOI: 10.1146/annurev-phyto-073009-114457

Source DB:  PubMed          Journal:  Annu Rev Phytopathol        ISSN: 0066-4286            Impact factor:   13.078


  114 in total

1.  An important role of an inducible RNA-dependent RNA polymerase in plant antiviral defense.

Authors:  Z Xie; B Fan; C Chen; Z Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-15       Impact factor: 11.205

2.  Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins.

Authors:  Joshua L Heazlewood; Julian S Tonti-Filippini; Alexander M Gout; David A Day; James Whelan; A Harvey Millar
Journal:  Plant Cell       Date:  2003-12-11       Impact factor: 11.277

3.  Pronounced intraspecific haplotype divergence at the RPP5 complex disease resistance locus of Arabidopsis.

Authors:  L Noël; T L Moores; E A van Der Biezen; M Parniske; M J Daniels; J E Parker; J D Jones
Journal:  Plant Cell       Date:  1999-11       Impact factor: 11.277

4.  Suppression of RNA silencing by a geminivirus nuclear protein, AC2, correlates with transactivation of host genes.

Authors:  Daniela Trinks; R Rajeswaran; P V Shivaprasad; Rashid Akbergenov; Edward J Oakeley; K Veluthambi; Thomas Hohn; Mikhail M Pooggin
Journal:  J Virol       Date:  2005-02       Impact factor: 5.103

5.  Arabidopsis RPP4 is a member of the RPP5 multigene family of TIR-NB-LRR genes and confers downy mildew resistance through multiple signalling components.

Authors:  Erik A van der Biezen; Cecilie T Freddie; Katherine Kahn; Jane E Parker; Jonathan D G Jones
Journal:  Plant J       Date:  2002-02       Impact factor: 6.417

Review 6.  Hydrogen peroxide and nitric oxide as signalling molecules in plants.

Authors:  Steven J Neill; Radhika Desikan; Andrew Clarke; Roger D Hurst; John T Hancock
Journal:  J Exp Bot       Date:  2002-05       Impact factor: 6.992

7.  Adenosine kinase inhibition and suppression of RNA silencing by geminivirus AL2 and L2 proteins.

Authors:  Hui Wang; Kenneth J Buckley; Xiaojuan Yang; R Cody Buchmann; David M Bisaro
Journal:  J Virol       Date:  2005-06       Impact factor: 5.103

8.  RNA silencing of host transcripts by cauliflower mosaic virus requires coordinated action of the four Arabidopsis Dicer-like proteins.

Authors:  Guillaume Moissiard; Olivier Voinnet
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-12       Impact factor: 11.205

9.  Transgenically expressed viral RNA silencing suppressors interfere with microRNA methylation in Arabidopsis.

Authors:  Bin Yu; Elisabeth J Chapman; Zhiyong Yang; James C Carrington; Xuemei Chen
Journal:  FEBS Lett       Date:  2006-05-02       Impact factor: 4.124

10.  Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing.

Authors:  Todd Blevins; Rajendran Rajeswaran; Padubidri V Shivaprasad; Daria Beknazariants; Azeddine Si-Ammour; Hyun-Sook Park; Franck Vazquez; Dominique Robertson; Frederick Meins; Thomas Hohn; Mikhail M Pooggin
Journal:  Nucleic Acids Res       Date:  2006-11-07       Impact factor: 16.971

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  109 in total

Review 1.  Botrytis small RNA Bc-siR37 suppresses plant defense genes by cross-kingdom RNAi.

Authors:  Ming Wang; Arne Weiberg; Exequiel Dellota; Daniel Yamane; Hailing Jin
Journal:  RNA Biol       Date:  2017-03-07       Impact factor: 4.652

Review 2.  RNA silencing suppression by plant pathogens: defence, counter-defence and counter-counter-defence.

Authors:  Nathan Pumplin; Olivier Voinnet
Journal:  Nat Rev Microbiol       Date:  2013-11       Impact factor: 60.633

3.  MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors.

Authors:  Patricia Baldrich; Sonia Campo; Ming-Tsung Wu; Tze-Tze Liu; Yue-Ie Caroline Hsing; Blanca San Segundo
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

Review 4.  Host-Pathogen interactions modulated by small RNAs.

Authors:  Waqar Islam; Saif Ul Islam; Muhammad Qasim; Liande Wang
Journal:  RNA Biol       Date:  2017-04-21       Impact factor: 4.652

5.  In silico identification and computational characterization of endogenous small interfering RNAs from diverse grapevine tissues and stages.

Authors:  Xudong Zhu; Songtao Jiu; Xiaopeng Li; Kekun Zhang; Mengqi Wang; Chen Wang; Jinggui Fang
Journal:  Genes Genomics       Date:  2018-04-04       Impact factor: 1.839

6.  Fungal small RNAs suppress plant immunity by hijacking host RNA interference pathways.

Authors:  Arne Weiberg; Ming Wang; Feng-Mao Lin; Hongwei Zhao; Zhihong Zhang; Isgouhi Kaloshian; Hsien-Da Huang; Hailing Jin
Journal:  Science       Date:  2013-10-04       Impact factor: 47.728

7.  Transgenic plants that express the phytoplasma effector SAP11 show altered phosphate starvation and defense responses.

Authors:  Yen-Ting Lu; Meng-Ying Li; Kai-Tan Cheng; Choon Meng Tan; Li-Wen Su; Wei-Yi Lin; Hsien-Tzung Shih; Tzyy-Jen Chiou; Jun-Yi Yang
Journal:  Plant Physiol       Date:  2014-01-24       Impact factor: 8.340

8.  Small RNA profiling of virus-infected grapevines: evidences for virus infection-associated and variety-specific miRNAs.

Authors:  Kashmir Singh; Aarthi Talla; Wenping Qiu
Journal:  Funct Integr Genomics       Date:  2012-08-19       Impact factor: 3.410

Review 9.  A systematic analysis of apple root resistance traits to Pythium ultimum infection and the underpinned molecular regulations of defense activation.

Authors:  Yanmin Zhu; Melody Saltzgiver
Journal:  Hortic Res       Date:  2020-05-01       Impact factor: 6.793

Review 10.  Contribution of small RNA pathway components in plant immunity.

Authors:  Jang-Kyun Seo; Jianguo Wu; Yifan Lii; Yi Li; Hailing Jin
Journal:  Mol Plant Microbe Interact       Date:  2013-06       Impact factor: 4.171

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