Literature DB >> 20668468

Carriers of rare missense variants in IFIH1 are protected from psoriasis.

Yonghong Li1, Wilson Liao, Michele Cargill, Monica Chang, Nori Matsunami, Bing-Jian Feng, Annie Poon, Kristina P Callis-Duffin, Joseph J Catanese, Anne M Bowcock, Mark F Leppert, Pui-Yan Kwok, Gerald G Krueger, Ann B Begovich.   

Abstract

Testing of ∼25,000 putative functional single-nucleotide polymorphisms (SNPs) across the human genome in a genetic association study has identified three psoriasis genes, IL12B, IL23R, and IL13. We now report evidence for the association of psoriasis risk with missense SNPs in the interferon induced with helicase C domain 1 gene (IFIH1). The rare alleles of two independent SNPs were associated with decreased risk of psoriasis--rs35667974 (Ile923Val): odds ratio (OR) for minor allele carriers is 0.43, P=2.36 × 10(-5) (2,098 cases vs. 1,748 controls); and rs10930046 (His460Arg): OR for minor allele carriers is 0.51, P=6.47 × 10(-4) (2,098 cases vs. 1,744 controls). Compared to noncarriers, carriers of the 923Val and/or 460Arg variants were protected from psoriasis (OR=0.46, P=5.56 × 10(-8)). To our knowledge, these results suggest that IFIH1 is a previously unreported psoriasis gene.

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Year:  2010        PMID: 20668468      PMCID: PMC3680368          DOI: 10.1038/jid.2010.214

Source DB:  PubMed          Journal:  J Invest Dermatol        ISSN: 0022-202X            Impact factor:   8.551


  35 in total

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7.  Genome-wide scan reveals association of psoriasis with IL-23 and NF-kappaB pathways.

Authors:  Rajan P Nair; Kristina Callis Duffin; Cynthia Helms; Jun Ding; Philip E Stuart; David Goldgar; Johann E Gudjonsson; Yun Li; Trilokraj Tejasvi; Bing-Jian Feng; Andreas Ruether; Stefan Schreiber; Michael Weichenthal; Dafna Gladman; Proton Rahman; Steven J Schrodi; Sampath Prahalad; Stephen L Guthery; Judith Fischer; Wilson Liao; Pui-Yan Kwok; Alan Menter; G Mark Lathrop; Carol A Wise; Ann B Begovich; John J Voorhees; James T Elder; Gerald G Krueger; Anne M Bowcock; Gonçalo R Abecasis
Journal:  Nat Genet       Date:  2009-01-25       Impact factor: 38.330

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Journal:  Hum Mol Genet       Date:  2008-03-25       Impact factor: 6.150

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Journal:  PLoS One       Date:  2007-09-19       Impact factor: 3.240

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Journal:  N Engl J Med       Date:  2008-12-10       Impact factor: 91.245

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  26 in total

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2.  Genetic Epidemiology of Psoriasis.

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Review 3.  The immunogenetics of Psoriasis: A comprehensive review.

Authors:  Jamie L Harden; James G Krueger; Anne M Bowcock
Journal:  J Autoimmun       Date:  2015-07-26       Impact factor: 7.094

4.  RNA editing with CRISPR-Cas13.

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7.  Weighted selective collapsing strategy for detecting rare and common variants in genetic association study.

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8.  Admixture mapping in lupus identifies multiple functional variants within IFIH1 associated with apoptosis, inflammation, and autoantibody production.

Authors:  Julio E Molineros; Amit K Maiti; Celi Sun; Loren L Looger; Shizhong Han; Xana Kim-Howard; Stuart Glenn; Adam Adler; Jennifer A Kelly; Timothy B Niewold; Gary S Gilkeson; Elizabeth E Brown; Graciela S Alarcón; Jeffrey C Edberg; Michelle Petri; Rosalind Ramsey-Goldman; John D Reveille; Luis M Vilá; Barry I Freedman; Betty P Tsao; Lindsey A Criswell; Chaim O Jacob; Jason H Moore; Timothy J Vyse; Carl L Langefeld; Joel M Guthridge; Patrick M Gaffney; Kathy L Moser; R Hal Scofield; Marta E Alarcón-Riquelme; Scott M Williams; Joan T Merrill; Judith A James; Kenneth M Kaufman; Robert P Kimberly; John B Harley; Swapan K Nath
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10.  Psoriasis patients are enriched for genetic variants that protect against HIV-1 disease.

Authors:  Haoyan Chen; Genki Hayashi; Olivia Y Lai; Alexander Dilthey; Peter J Kuebler; Tami V Wong; Maureen P Martin; Marcelo A Fernandez Vina; Gil McVean; Matthias Wabl; Kieron S Leslie; Toby Maurer; Jeffrey N Martin; Steven G Deeks; Mary Carrington; Anne M Bowcock; Douglas F Nixon; Wilson Liao
Journal:  PLoS Genet       Date:  2012-02-16       Impact factor: 5.917

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