Literature DB >> 20663572

The molecular and gene regulatory signature of a neuron.

Oliver Hobert1, Inés Carrera, Nikolaos Stefanakis.   

Abstract

Neuron-type specific gene batteries define the morphological and functional diversity of cell types in the nervous system. Here, we discuss the composition of neuron-type specific gene batteries and illustrate gene regulatory strategies which determine the unique gene expression profiles and molecular composition of individual neuronal cell types from C. elegans to higher vertebrates. Based on principles learned from prokaryotic gene regulation, we argue that neuronal terminal gene batteries are functionally grouped into parallel-acting 'regulons'. The theoretical concepts discussed here provide testable hypotheses for future experimental analysis of the exact gene-regulatory mechanisms employed in the generation of neuronal diversity and identity.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20663572      PMCID: PMC2947585          DOI: 10.1016/j.tins.2010.05.006

Source DB:  PubMed          Journal:  Trends Neurosci        ISSN: 0166-2236            Impact factor:   13.837


  63 in total

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2.  Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box.

Authors:  Ken-ichi Yoshida; Hirotake Yamaguchi; Masaki Kinehara; Yo-hei Ohki; Yoshiko Nakaura; Yasutaro Fujita
Journal:  Mol Microbiol       Date:  2003-07       Impact factor: 3.501

3.  STUDIES ON THE MECHANISM OF REPRESSION OF ARGININE BIOSYNTHESIS IN ESCHERICHIA COLI. II. DOMINANCE OF REPRESSIBILITY IN DIPLOIDS.

Authors:  W K MAAS
Journal:  J Mol Biol       Date:  1964-03       Impact factor: 5.469

4.  NRSF/REST is required in vivo for repression of multiple neuronal target genes during embryogenesis.

Authors:  Z F Chen; A J Paquette; D J Anderson
Journal:  Nat Genet       Date:  1998-10       Impact factor: 38.330

Review 5.  Progression from extrinsic to intrinsic signaling in cell fate specification: a view from the nervous system.

Authors:  T Edlund; T M Jessell
Journal:  Cell       Date:  1999-01-22       Impact factor: 41.582

6.  Not committing barbarisms: Sherrington and the synapse, 1897.

Authors:  E M Tansey
Journal:  Brain Res Bull       Date:  1997       Impact factor: 4.077

7.  A cell type-preferred silencer element that controls the neural-specific expression of the SCG10 gene.

Authors:  N Mori; R Stein; O Sigmund; D J Anderson
Journal:  Neuron       Date:  1990-04       Impact factor: 17.173

8.  Computational discovery of DNA motifs associated with cell type-specific gene expression in Ciona.

Authors:  Takehiro Kusakabe; Reiko Yoshida; Yoko Ikeda; Motoyuki Tsuda
Journal:  Dev Biol       Date:  2004-12-15       Impact factor: 3.582

9.  Coordinated transcriptional regulation of the unc-25 glutamic acid decarboxylase and the unc-47 GABA vesicular transporter by the Caenorhabditis elegans UNC-30 homeodomain protein.

Authors:  C Eastman; H R Horvitz; Y Jin
Journal:  J Neurosci       Date:  1999-08-01       Impact factor: 6.167

10.  Genomic cis-regulatory architecture and trans-acting regulators of a single interneuron-specific gene battery in C. elegans.

Authors:  Adam S Wenick; Oliver Hobert
Journal:  Dev Cell       Date:  2004-06       Impact factor: 12.270

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  56 in total

1.  A novel role for the zinc-finger transcription factor EGL-46 in the differentiation of gas-sensing neurons in Caenorhabditis elegans.

Authors:  Teresa Rojo Romanos; Jakob Gramstrup Petersen; Alba Redo Riveiro; Roger Pocock
Journal:  Genetics       Date:  2014-11-12       Impact factor: 4.562

2.  Functional profiling of neurons through cellular neuropharmacology.

Authors:  Russell W Teichert; Nathan J Smith; Shrinivasan Raghuraman; Doju Yoshikami; Alan R Light; Baldomero M Olivera
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-23       Impact factor: 11.205

3.  Editorial: models of invertebrate neurons in culture.

Authors:  Amir Ayali
Journal:  J Mol Histol       Date:  2012-04-15       Impact factor: 2.611

4.  Temporally tuned neuronal differentiation supports the functional remodeling of a neuronal network in Drosophila.

Authors:  Lyubov Veverytsa; Douglas W Allan
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-05       Impact factor: 11.205

Review 5.  The early bird catches the worm: new technologies for the Caenorhabditis elegans toolkit.

Authors:  Xiao Xu; Stuart K Kim
Journal:  Nat Rev Genet       Date:  2011-10-04       Impact factor: 53.242

6.  Neuromodulation independently determines correlated channel expression and conductance levels in motor neurons of the stomatogastric ganglion.

Authors:  Simone Temporal; Mohati Desai; Olga Khorkova; Gladis Varghese; Aihua Dai; David J Schulz; Jorge Golowasch
Journal:  J Neurophysiol       Date:  2011-10-12       Impact factor: 2.714

7.  Inverted selective plane illumination microscopy (iSPIM) enables coupled cell identity lineaging and neurodevelopmental imaging in Caenorhabditis elegans.

Authors:  Yicong Wu; Alireza Ghitani; Ryan Christensen; Anthony Santella; Zhuo Du; Gary Rondeau; Zhirong Bao; Daniel Colón-Ramos; Hari Shroff
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-17       Impact factor: 11.205

Review 8.  REST and CoREST are transcriptional and epigenetic regulators of seminal neural fate decisions.

Authors:  Irfan A Qureshi; Solen Gokhan; Mark F Mehler
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

9.  Egr-1 induces DARPP-32 expression in striatal medium spiny neurons via a conserved intragenic element.

Authors:  Serene Keilani; Samira Chandwani; Georgia Dolios; Alexey Bogush; Heike Beck; Antonis K Hatzopoulos; Gadiparthi N Rao; Elizabeth A Thomas; Rong Wang; Michelle E Ehrlich
Journal:  J Neurosci       Date:  2012-05-16       Impact factor: 6.167

10.  A combinatorial regulatory signature controls terminal differentiation of the dopaminergic nervous system in C. elegans.

Authors:  Maria Doitsidou; Nuria Flames; Irini Topalidou; Namiko Abe; Terry Felton; Laura Remesal; Tatiana Popovitchenko; Richard Mann; Martin Chalfie; Oliver Hobert
Journal:  Genes Dev       Date:  2013-06-15       Impact factor: 11.361

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