Literature DB >> 20658974

Insight into protein-protein interactions from analytical ultracentrifugation.

Stephen E Harding1, Arthur J Rowe.   

Abstract

Analytical ultracentrifugation is a free solution technique with no supplementary immobilization, columns or membranes required, and can be used to study self-association and hetero-interactions, stoichiometry, reversibility and interaction strength across a very large dynamic range (dissociation constants from 10(-12) M to 10(-1) M). In the present paper, we review some of the advances that have been made in the two different types of sedimentation experiment--sedimentation equilibrium and sedimentation velocity--for the analysis of protein-protein interactions and indicate how major complications such as thermodynamic and hydrodynamic non-ideality can be dealt with.

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Year:  2010        PMID: 20658974     DOI: 10.1042/BST0380901

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  28 in total

1.  Variable-Field Analytical Ultracentrifugation: I. Time-Optimized Sedimentation Equilibrium.

Authors:  Jia Ma; Michael Metrick; Rodolfo Ghirlando; Huaying Zhao; Peter Schuck
Journal:  Biophys J       Date:  2015-08-18       Impact factor: 4.033

2.  Enhanced Sample Handling for Analytical Ultracentrifugation with 3D-Printed Centerpieces.

Authors:  Samuel C To; Chad A Brautigam; Sumit K Chaturvedi; Mary T Bollard; Jonathan Krynitsky; John W Kakareka; Thomas J Pohida; Huaying Zhao; Peter Schuck
Journal:  Anal Chem       Date:  2019-04-15       Impact factor: 6.986

3.  Sedimentation of Reversibly Interacting Macromolecules with Changes in Fluorescence Quantum Yield.

Authors:  Sumit K Chaturvedi; Huaying Zhao; Peter Schuck
Journal:  Biophys J       Date:  2017-04-11       Impact factor: 4.033

4.  Molecular determinants of tetramerization in the KcsA cytoplasmic domain.

Authors:  Guy Kamnesky; Orel Hirschhorn; Hadassa Shaked; Jingfei Chen; Lishan Yao; Jordan H Chill
Journal:  Protein Sci       Date:  2014-08-12       Impact factor: 6.725

5.  The use of analytical sedimentation velocity to extract thermodynamic linkage.

Authors:  James L Cole; John J Correia; Walter F Stafford
Journal:  Biophys Chem       Date:  2011-05-27       Impact factor: 2.352

6.  The analysis of macromolecular interactions by sedimentation equilibrium.

Authors:  Rodolfo Ghirlando
Journal:  Methods       Date:  2010-12-16       Impact factor: 3.608

7.  A histogram approach to the quality of fit in sedimentation velocity analyses.

Authors:  Jia Ma; Huaying Zhao; Peter Schuck
Journal:  Anal Biochem       Date:  2015-05-07       Impact factor: 3.365

8.  Improving the thermal, radial, and temporal accuracy of the analytical ultracentrifuge through external references.

Authors:  Rodolfo Ghirlando; Andrea Balbo; Grzegorz Piszczek; Patrick H Brown; Marc S Lewis; Chad A Brautigam; Peter Schuck; Huaying Zhao
Journal:  Anal Biochem       Date:  2013-05-24       Impact factor: 3.365

9.  On the acquisition and analysis of microscale thermophoresis data.

Authors:  Thomas H Scheuermann; Shae B Padrick; Kevin H Gardner; Chad A Brautigam
Journal:  Anal Biochem       Date:  2015-12-29       Impact factor: 3.365

Review 10.  Protein-protein interaction analysis for functional characterization of helicases.

Authors:  Boris L Zybailov; Alicia K Byrd; Galina V Glazko; Yasir Rahmatallah; Kevin D Raney
Journal:  Methods       Date:  2016-04-20       Impact factor: 3.608

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