Literature DB >> 20656823

Demequina globuliformis sp. nov., Demequina oxidasica sp. nov. and Demequina aurantiaca sp. nov., actinobacteria isolated from marine environments, and proposal of Demequinaceae fam. nov.

Harumi Ue1, Yoshihide Matsuo2, Hiroaki Kasai3, Akira Yokota1.   

Abstract

Three Gram-stain-positive actinobacterial strains, designated YM24-125(T), YM05-1041(T) and YM12-102(T), were isolated from marine environments. Phylogenetic analysis based on 16S rRNA gene sequences indicated that they belonged to the suborder Micrococcineae and were most closely related to members of the genus Demequina with 95.0-98.4 % sequence similarities. Cells of strains YM05-1041(T) and YM12-102(T) were rod-shaped, similar to members of the genus Demequina, while cells of strain YM24-125(T) were cocci to short ovoid rods. All strains grew in the absence of NaCl, but tolerated up to 15 % NaCl. The major menaquinone was demethylmenaquinone DMK-9 (H(4)) and the major polar lipids were phosphatidylinositol, diphosphatidylglycerol and phosphatidyglycerol. All strains contained straight-chain, iso-branched and anteiso-branched saturated fatty acids. The DNA G+C contents were 65.3-67.3 mol%. The peptidoglycans of strains YM05-1041(T) and YM12-102(T) were the A4β type with ornithine while that of strain YM24-125(T) contained ornithine and lysine as diamino acids. Phylogenetic analyses and differences in physiological and biochemical characteristics indicated that these three isolates represent novel species within the genus Demequina, for which the names Demequina globuliformis sp. nov. (with YM24-125(T)  = NBRC 106266(T)  = KCTC 19747(T)  = MBIC 08349(T) as the type strain), Demequina oxidasica sp. nov. (with YM05-1041(T)  = NBRC 106264(T)  = KCTC 19746(T)  = MBIC 08346(T) as the type strain) and Demequina aurantiaca sp. nov. (with YM12-102(T)  = NBRC 106265(T)  = KCTC 19745(T)  = MBIC 08347(T) as the type strain) are proposed. Based on differences in the quinone system, the presence of demethylmenaquinone DMK-9(H(4)) and the pattern of 16S rRNA signatures, the three novel strains and current members of the genus Demequina represent a unique family within the suborder Micrococcineae. Therefore, the family Demequinaceae fam. nov. is also proposed.

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Year:  2010        PMID: 20656823     DOI: 10.1099/ijs.0.024299-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Genome-Based Taxonomic Classification of the Phylum Actinobacteria.

Authors:  Imen Nouioui; Lorena Carro; Marina García-López; Jan P Meier-Kolthoff; Tanja Woyke; Nikos C Kyrpides; Rüdiger Pukall; Hans-Peter Klenk; Michael Goodfellow; Markus Göker
Journal:  Front Microbiol       Date:  2018-08-22       Impact factor: 5.640

2.  Draft genome sequences of eight type strains of the genus demequina.

Authors:  Moriyuki Hamada; Natsuko Ichikawa; Akio Oguchi; Hisayuki Komaki; Tomohiko Tamura; Nobuyuki Fujita
Journal:  Genome Announc       Date:  2015-04-16

3.  Safety assessment of antibiotic and probiotic feed additives for Gallus gallus domesticus.

Authors:  D P Neveling; L van Emmenes; J J Ahire; E Pieterse; C Smith; L M T Dicks
Journal:  Sci Rep       Date:  2017-10-16       Impact factor: 4.379

4.  Revisiting the Taxonomy of the Genus Arcobacter: Getting Order From the Chaos.

Authors:  Alba Pérez-Cataluña; Nuria Salas-Massó; Ana L Diéguez; Sabela Balboa; Alberto Lema; Jesús L Romalde; Maria J Figueras
Journal:  Front Microbiol       Date:  2018-09-04       Impact factor: 5.640

5.  Mangrove crab intestine and habitat sediment microbiomes cooperatively work on carbon and nitrogen cycling.

Authors:  Prasert Tongununui; Yuki Kuriya; Masahiro Murata; Hideki Sawada; Michihiro Araki; Mika Nomura; Katsuji Morioka; Tomoaki Ichie; Kou Ikejima; Kohsuke Adachi
Journal:  PLoS One       Date:  2021-12-31       Impact factor: 3.240

  5 in total

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