Literature DB >> 20653509

Targeting intrinsically disordered proteins in neurodegenerative and protein dysfunction diseases: another illustration of the D(2) concept.

Vladimir N Uversky1.   

Abstract

Many biologically active proteins, which are usually called intrinsically disordered or natively unfolded proteins, lack stable tertiary and/or secondary structure under physiological conditions in vitro. Their functions complement the functional repertoire of ordered proteins, with intrinsically disordered proteins (IDPs) often being involved in regulation, signaling and control. Their amino acid sequences and compositions are very different from those of ordered proteins, making reliable identification of IDPs possible at the proteome level. IDPs are highly abundant in various human diseases, including neurodegeneration and other protein dysfunction maladies and, therefore, represent attractive novel drug targets. Some of the aspects of IDPs, as well as their roles in neurodegeneration and protein dysfunction diseases, are discussed in this article, together with the peculiarities of IDPs as potential drug targets.

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Year:  2010        PMID: 20653509      PMCID: PMC3371274          DOI: 10.1586/epr.10.36

Source DB:  PubMed          Journal:  Expert Rev Proteomics        ISSN: 1478-9450            Impact factor:   3.940


  210 in total

1.  Evidence for a recruitment and sequestration mechanism in Huntington's disease.

Authors:  E Preisinger; B M Jordan; A Kazantsev; D Housman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1999-06-29       Impact factor: 6.237

2.  Solvent-induced collapse of alpha-synuclein and acid-denatured cytochrome c.

Authors:  A S Morar; A Olteanu; G B Young; G J Pielak
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

Review 3.  Protein folding revisited. A polypeptide chain at the folding-misfolding-nonfolding cross-roads: which way to go?

Authors:  V N Uversky
Journal:  Cell Mol Life Sci       Date:  2003-09       Impact factor: 9.261

Review 4.  Flexible nets. The roles of intrinsic disorder in protein interaction networks.

Authors:  A Keith Dunker; Marc S Cortese; Pedro Romero; Lilia M Iakoucheva; Vladimir N Uversky
Journal:  FEBS J       Date:  2005-10       Impact factor: 5.542

5.  Anatomy of protein pockets and cavities: measurement of binding site geometry and implications for ligand design.

Authors:  J Liang; H Edelsbrunner; C Woodward
Journal:  Protein Sci       Date:  1998-09       Impact factor: 6.725

6.  Localization of gene for human p53 tumour antigen to band 17p13.

Authors:  M Isobe; B S Emanuel; D Givol; M Oren; C M Croce
Journal:  Nature       Date:  1986 Mar 6-12       Impact factor: 49.962

7.  Composition Profiler: a tool for discovery and visualization of amino acid composition differences.

Authors:  Vladimir Vacic; Vladimir N Uversky; A Keith Dunker; Stefano Lonardi
Journal:  BMC Bioinformatics       Date:  2007-06-19       Impact factor: 3.169

8.  Chk2 regulates irradiation-induced, p53-mediated apoptosis in Drosophila.

Authors:  Malte Peters; Carmela DeLuca; Atsushi Hirao; Vuk Stambolic; Julia Potter; Lily Zhou; Jennifer Liepa; Bryan Snow; Sudha Arya; Jorge Wong; Denis Bouchard; Richard Binari; Armen S Manoukian; Tak W Mak
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-09       Impact factor: 11.205

Review 9.  Intrinsically disordered proteins in human diseases: introducing the D2 concept.

Authors:  Vladimir N Uversky; Christopher J Oldfield; A Keith Dunker
Journal:  Annu Rev Biophys       Date:  2008       Impact factor: 12.981

10.  Molecular cloning of cDNA encoding an unrecognized component of amyloid in Alzheimer disease.

Authors:  K Uéda; H Fukushima; E Masliah; Y Xia; A Iwai; M Yoshimoto; D A Otero; J Kondo; Y Ihara; T Saitoh
Journal:  Proc Natl Acad Sci U S A       Date:  1993-12-01       Impact factor: 11.205

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  41 in total

1.  Mechanism of the interaction between the intrinsically disordered C-terminus of the pro-apoptotic ARTS protein and the Bir3 domain of XIAP.

Authors:  Tali H Reingewertz; Deborah E Shalev; Shahar Sukenik; Ofrah Blatt; Shahar Rotem-Bamberger; Mario Lebendiker; Sarit Larisch; Assaf Friedler
Journal:  PLoS One       Date:  2011-09-20       Impact factor: 3.240

2.  Profiling the dynamic interfaces of fluorinated transcription complexes for ligand discovery and characterization.

Authors:  William C Pomerantz; Ningkun Wang; Ashley K Lipinski; Rurun Wang; Tomasz Cierpicki; Anna K Mapp
Journal:  ACS Chem Biol       Date:  2012-07-02       Impact factor: 5.100

3.  From sequence and forces to structure, function, and evolution of intrinsically disordered proteins.

Authors:  Julie D Forman-Kay; Tanja Mittag
Journal:  Structure       Date:  2013-09-03       Impact factor: 5.006

Review 4.  The Structural and Functional Diversity of Intrinsically Disordered Regions in Transmembrane Proteins.

Authors:  Rajeswari Appadurai; Vladimir N Uversky; Anand Srivastava
Journal:  J Membr Biol       Date:  2019-05-28       Impact factor: 1.843

Review 5.  Forkhead followed by disordered tail: The intrinsically disordered regions of FOXO3a.

Authors:  Feng Wang; Christopher B Marshall; Mitsuhiko Ikura
Journal:  Intrinsically Disord Proteins       Date:  2015-06-03

Review 6.  How order and disorder within paramyxoviral nucleoproteins and phosphoproteins orchestrate the molecular interplay of transcription and replication.

Authors:  Sonia Longhi; Louis-Marie Bloyet; Stefano Gianni; Denis Gerlier
Journal:  Cell Mol Life Sci       Date:  2017-06-09       Impact factor: 9.261

Review 7.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

Review 8.  The Ubiquitin-Proteasome System and Molecular Chaperone Deregulation in Alzheimer's Disease.

Authors:  Yanuar Alan Sulistio; Klaus Heese
Journal:  Mol Neurobiol       Date:  2015-01-07       Impact factor: 5.590

Review 9.  Pathological unfoldomics of uncontrolled chaos: intrinsically disordered proteins and human diseases.

Authors:  Vladimir N Uversky; Vrushank Davé; Lilia M Iakoucheva; Prerna Malaney; Steven J Metallo; Ravi Ramesh Pathak; Andreas C Joerger
Journal:  Chem Rev       Date:  2014-05-15       Impact factor: 60.622

Review 10.  Lessons learned from protein aggregation: toward technological and biomedical applications.

Authors:  César L Avila; Silvina Chaves; Sergio B Socias; Esteban Vera-Pingitore; Florencia González-Lizárraga; Cecilia Vera; Diego Ploper; Rosana Chehín
Journal:  Biophys Rev       Date:  2017-09-13
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