Literature DB >> 20653057

Protein-protein interaction map is a key gateway into liver regeneration.

Chao Xie1, Jin Gao, Run-Zhi Zhu, Yun-Sheng Yuan, Hong-Lin He, Qiu-Shi Huang, Wei Han, Yan Yu.   

Abstract

Recent studies indicate that the process of liver regeneration involves multiple signaling pathways and a variety of genes, cytokines and growth factors. Protein-protein interactions (PPIs) play a role in nearly all events that take place within the cell and PPI maps should be helpful in further understanding the process of liver regeneration. In this review, we discuss recent progress in understanding the PPIs that occur during liver regeneration especially those in the transforming growth factor beta signaling pathways. We believe the use of large-scale PPI maps for integrating the information already known about the liver regeneration is a useful approach in understanding liver regeneration from the standpoint of systems biology.

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Year:  2010        PMID: 20653057      PMCID: PMC2909548          DOI: 10.3748/wjg.v16.i28.3491

Source DB:  PubMed          Journal:  World J Gastroenterol        ISSN: 1007-9327            Impact factor:   5.742


  47 in total

1.  Co-evolutionary analysis reveals insights into protein-protein interactions.

Authors:  Chern-Sing Goh; Fred E Cohen
Journal:  J Mol Biol       Date:  2002-11-15       Impact factor: 5.469

Review 2.  Analyzing cellular biochemistry in terms of molecular networks.

Authors:  Yu Xia; Haiyuan Yu; Ronald Jansen; Michael Seringhaus; Sarah Baxter; Dov Greenbaum; Hongyu Zhao; Mark Gerstein
Journal:  Annu Rev Biochem       Date:  2004       Impact factor: 23.643

Review 3.  Regulation of liver regeneration.

Authors:  Arthur Zimmermann
Journal:  Nephrol Dial Transplant       Date:  2004-07       Impact factor: 5.992

Review 4.  Liver regeneration: mechanisms, mysteries and more.

Authors:  Aamir Z Khan; Satvinder S Mudan
Journal:  ANZ J Surg       Date:  2007 Jan-Feb       Impact factor: 1.872

Review 5.  Prometheus' challenge: molecular, cellular and systemic aspects of liver regeneration.

Authors:  Payam Samareh Pahlavan; Robert E Feldmann; Christos Zavos; Jannis Kountouras
Journal:  J Surg Res       Date:  2006-02-03       Impact factor: 2.192

6.  A novel genetic system to detect protein-protein interactions.

Authors:  S Fields; O Song
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

7.  A comprehensive two-hybrid analysis to explore the yeast protein interactome.

Authors:  T Ito; T Chiba; R Ozawa; M Yoshida; M Hattori; Y Sakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

8.  A map of the interactome network of the metazoan C. elegans.

Authors:  Siming Li; Christopher M Armstrong; Nicolas Bertin; Hui Ge; Stuart Milstein; Mike Boxem; Pierre-Olivier Vidalain; Jing-Dong J Han; Alban Chesneau; Tong Hao; Debra S Goldberg; Ning Li; Monica Martinez; Jean-François Rual; Philippe Lamesch; Lai Xu; Muneesh Tewari; Sharyl L Wong; Lan V Zhang; Gabriel F Berriz; Laurent Jacotot; Philippe Vaglio; Jérôme Reboul; Tomoko Hirozane-Kishikawa; Qianru Li; Harrison W Gabel; Ahmed Elewa; Bridget Baumgartner; Debra J Rose; Haiyuan Yu; Stephanie Bosak; Reynaldo Sequerra; Andrew Fraser; Susan E Mango; William M Saxton; Susan Strome; Sander Van Den Heuvel; Fabio Piano; Jean Vandenhaute; Claude Sardet; Mark Gerstein; Lynn Doucette-Stamm; Kristin C Gunsalus; J Wade Harper; Michael E Cusick; Frederick P Roth; David E Hill; Marc Vidal
Journal:  Science       Date:  2004-01-02       Impact factor: 47.728

9.  A protein-protein interaction network of transcription factors acting during liver cell proliferation.

Authors:  Jin Gao; Wen-Xi Li; Si-Qian Feng; Yun-Sheng Yuan; Da-Fang Wan; Wei Han; Yan Yu
Journal:  Genomics       Date:  2008-02-05       Impact factor: 5.736

Review 10.  Deciphering protein-protein interactions. Part II. Computational methods to predict protein and domain interaction partners.

Authors:  Benjamin A Shoemaker; Anna R Panchenko
Journal:  PLoS Comput Biol       Date:  2007-04-27       Impact factor: 4.475

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  1 in total

1.  Hepatotropic growth factors protect hepatocytes during inflammation by upregulation of antioxidative systems.

Authors:  Matthias Glanemann; Daniel Knobeloch; Sabrina Ehnert; Mihaela Culmes; Claudine Seeliger; Daniel Seehofer; Andreas K Nussler
Journal:  World J Gastroenterol       Date:  2011-05-07       Impact factor: 5.742

  1 in total

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