Literature DB >> 20637905

Robotic large-scale application of wheat cell-free translation to structural studies including membrane proteins.

Emily T Beebe1, Shin-Ichi Makino, Akira Nozawa, Yuko Matsubara, Ronnie O Frederick, John G Primm, Michael A Goren, Brian G Fox.   

Abstract

The use of the Protemist XE, an automated discontinuous-batch protein synthesis robot, in cell-free translation is reported. The soluble Galdieria sulphuraria protein DCN1 was obtained in greater than 2mg total synthesis yield per mL of reaction mixture from the Protemist XE, and the structure was subsequently solved by X-ray crystallography using material from one 10 mL synthesis (PDB ID: 3KEV). The Protemist XE was also capable of membrane protein translation. Thus human sigma-1 receptor was translated in the presence of unilamellar liposomes and bacteriorhodopsin was translated directly into detergent micelles in the presence of all-trans-retinal. The versatility, ease of use, and compact size of the Protemist XE robot demonstrate its suitability for large-scale synthesis of many classes of proteins.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20637905      PMCID: PMC3035758          DOI: 10.1016/j.nbt.2010.07.003

Source DB:  PubMed          Journal:  N Biotechnol        ISSN: 1871-6784            Impact factor:   5.079


  38 in total

1.  Visualization of proteins in acrylamide gels using ultraviolet illumination.

Authors:  Dmitri Kazmin; Robert A Edwards; Raymond J Turner; Eric Larson; Jean Starkey
Journal:  Anal Biochem       Date:  2002-02-01       Impact factor: 3.365

2.  Cell-free synthesis and functional characterization of sphingolipid synthases from parasitic trypanosomatid protozoa.

Authors:  Elitza S Sevova; Michael A Goren; Kevin J Schwartz; Fong-Fu Hsu; John Turk; Brian G Fox; James D Bangs
Journal:  J Biol Chem       Date:  2010-05-10       Impact factor: 5.157

3.  A strategy for identification and quantification of detergents frequently used in the purification of membrane proteins.

Authors:  Laura R Eriks; June A Mayor; Ronald S Kaplan
Journal:  Anal Biochem       Date:  2003-12-15       Impact factor: 3.365

4.  Cell-free synthesis of a functional ion channel in the absence of a membrane and in the presence of detergent.

Authors:  Catherine Berrier; Kyu-Ho Park; Saïd Abes; Anne Bibonne; Jean-Michel Betton; Alexandre Ghazi
Journal:  Biochemistry       Date:  2004-10-05       Impact factor: 3.162

Review 5.  Detergents for the stabilization and crystallization of membrane proteins.

Authors:  Gilbert G Privé
Journal:  Methods       Date:  2007-04       Impact factor: 3.608

6.  Practical cell-free protein synthesis system using purified wheat embryos.

Authors:  Kazuyuki Takai; Tatsuya Sawasaki; Yaeta Endo
Journal:  Nat Protoc       Date:  2010-01-21       Impact factor: 13.491

7.  Comparison of cell-based and cell-free protocols for producing target proteins from the Arabidopsis thaliana genome for structural studies.

Authors:  Robert C Tyler; David J Aceti; Craig A Bingman; Claudia C Cornilescu; Brian G Fox; Ronnie O Frederick; Won Bae Jeon; Min S Lee; Craig S Newman; Francis C Peterson; George N Phillips; Mark N Shahan; Shanteri Singh; Jikui Song; Hassan K Sreenath; Ejan M Tyler; Eldon L Ulrich; Dmitriy A Vinarov; Frank C Vojtik; Brian F Volkman; Russell L Wrobel; Qin Zhao; John L Markley
Journal:  Proteins       Date:  2005-05-15

8.  Sigma-1 receptor chaperones at the ER-mitochondrion interface regulate Ca(2+) signaling and cell survival.

Authors:  Teruo Hayashi; Tsung-Ping Su
Journal:  Cell       Date:  2007-11-02       Impact factor: 41.582

9.  The Center for Eukaryotic Structural Genomics.

Authors:  John L Markley; David J Aceti; Craig A Bingman; Brian G Fox; Ronnie O Frederick; Shin-ichi Makino; Karl W Nichols; George N Phillips; John G Primm; Sarata C Sahu; Frank C Vojtik; Brian F Volkman; Russell L Wrobel; Zsolt Zolnai
Journal:  J Struct Funct Genomics       Date:  2009-01-08

10.  Cell-free synthesis, functional refolding, and spectroscopic characterization of bacteriorhodopsin, an integral membrane protein.

Authors:  S Sonar; N Patel; W Fischer; K J Rothschild
Journal:  Biochemistry       Date:  1993-12-21       Impact factor: 3.162

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  8 in total

1.  Cell-free translation of biofuel enzymes.

Authors:  Taichi E Takasuka; Johnnie A Walker; Lai F Bergeman; Kirk A Vander Meulen; Shin-ichi Makino; Nathaniel L Elsen; Brian G Fox
Journal:  Methods Mol Biol       Date:  2014

Review 2.  High throughput platforms for structural genomics of integral membrane proteins.

Authors:  Filippo Mancia; James Love
Journal:  Curr Opin Struct Biol       Date:  2011-07-30       Impact factor: 6.809

3.  Development of a full-length human protein production pipeline.

Authors:  Justin Saul; Brianne Petritis; Sujay Sau; Femina Rauf; Michael Gaskin; Benjamin Ober-Reynolds; Irina Mineyev; Mitch Magee; John Chaput; Ji Qiu; Joshua LaBaer
Journal:  Protein Sci       Date:  2014-06-02       Impact factor: 6.725

4.  Cell-free expression of the outer membrane protein OprF of Pseudomonas aeruginosa for vaccine purposes.

Authors:  Géraldine Mayeux; Landry Gayet; Lavinia Liguori; Marine Odier; Donald K Martin; Sandra Cortès; Béatrice Schaack; Jean-Luc Lenormand
Journal:  Life Sci Alliance       Date:  2021-05-10

Review 5.  Easy Synthesis of Complex Biomolecular Assemblies: Wheat Germ Cell-Free Protein Expression in Structural Biology.

Authors:  Marie-Laure Fogeron; Lauriane Lecoq; Laura Cole; Matthias Harbers; Anja Böckmann
Journal:  Front Mol Biosci       Date:  2021-03-25

6.  Cell-free production of integral membrane aspartic acid proteases reveals zinc-dependent methyltransferase activity of the Pseudomonas aeruginosa prepilin peptidase PilD.

Authors:  Khaled A Aly; Emily T Beebe; Chi H Chan; Michael A Goren; Carolina Sepúlveda; Shin-ichi Makino; Brian G Fox; Katrina T Forest
Journal:  Microbiologyopen       Date:  2012-12-17       Impact factor: 3.139

7.  Use of Nanostructure-Initiator Mass Spectrometry to Deduce Selectivity of Reaction in Glycoside Hydrolases.

Authors:  Kai Deng; Taichi E Takasuka; Christopher M Bianchetti; Lai F Bergeman; Paul D Adams; Trent R Northen; Brian G Fox
Journal:  Front Bioeng Biotechnol       Date:  2015-10-27

Review 8.  Cell-free systems for accelerating glycoprotein expression and biomanufacturing.

Authors:  Jasmine Hershewe; Weston Kightlinger; Michael C Jewett
Journal:  J Ind Microbiol Biotechnol       Date:  2020-10-22       Impact factor: 3.346

  8 in total

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