Literature DB >> 20632206

Using standard nomenclature to adequately name transgenes, knockout gene alleles and any mutation associated to a genetically modified mouse strain.

Lluís Montoliu1, C Bruce A Whitelaw.   

Abstract

Mice provide an unlimited source of animal models to study mammalian gene function and human diseases. The powerful genetic modification toolbox existing for the mouse genome enables the creation of, literally, thousands of genetically modified mouse strains, carrying spontaneous or induced mutations, transgenes or knock-out/knock-in alleles which, in addition, can exist in hundreds of different genetic backgrounds. Such an immense diversity of individuals needs to be adequately annotated, to ensure that the most relevant information is kept associated with the name of each mouse line, and hence, the scientific community can correctly interpret and benefit from the reported animal model. Therefore, rules and guidelines for correctly naming genes, alleles and mouse strains are required. The Mouse Genome Informatics Database is the authoritative source of official names for mouse genes, alleles, and strains. Nomenclature follows the rules and guidelines established by the International Committee on Standardized Genetic Nomenclature for Mice. Herewith, both from the International Society for Transgenic Technologies (ISTT) and from the scientific journal Transgenic Research, we would like to encourage all our colleagues to adhere and follow adequately the standard nomenclature rules when describing mouse models. The entire scientific community using genetically modified mice in experiments will benefit.

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Year:  2010        PMID: 20632206     DOI: 10.1007/s11248-010-9428-z

Source DB:  PubMed          Journal:  Transgenic Res        ISSN: 0962-8819            Impact factor:   2.788


  16 in total

1.  Rules and guidelines for mouse gene, allele, and mutation nomenclature: a condensed version.

Authors:  Lois J Maltais; Judith A Blake; Teresa Chu; Cathleen M Lutz; Janan T Eppig; Ian Jackson
Journal:  Genomics       Date:  2002-04       Impact factor: 5.736

2.  Rules and guidelines for genetic nomenclature in mice: excerpted version. Committee on Standardized Genetic Nomenclature for Mice.

Authors:  M T Davisson
Journal:  Transgenic Res       Date:  1997-09       Impact factor: 2.788

3.  Formalin-induced pain is reduced in sigma(1) receptor knockout mice.

Authors:  Cruz Miguel Cendán; José Miguel Pujalte; Enrique Portillo-Salido; Lluís Montoliu; José M Baeyens
Journal:  Eur J Pharmacol       Date:  2005-03-21       Impact factor: 4.432

4.  A transgenic mouse model with inducible Tyrosinase gene expression using the tetracycline (Tet-on) system allows regulated rescue of abnormal chiasmatic projections found in albinism.

Authors:  Estela Giménez; Alfonso Lavado; Patricia Giraldo; Patricia Cozar; Glen Jeffery; Lluís Montoliu
Journal:  Pigment Cell Res       Date:  2004-08

5.  Characterization of Ayu17-449 gene expression and resultant kidney pathology in a knockout mouse model.

Authors:  Hua Tang; Kimi Araki; Zhenghua Li; Kenichi Yamamura
Journal:  Transgenic Res       Date:  2008-02-21       Impact factor: 2.788

6.  Ablation of the scaffold protein JLP causes reduced fertility in male mice.

Authors:  Asuka Iwanaga; Guangmin Wang; Davaakhuu Gantulga; Tokiharu Sato; Tuvshintugs Baljinnyam; Keiko Shimizu; Ken Takumi; Motoharu Hayashi; Takuya Akashi; Hideki Fuse; Kazushi Sugihara; Masahide Asano; Katsuji Yoshioka
Journal:  Transgenic Res       Date:  2008-06-24       Impact factor: 2.788

7.  Replacement of connexin40 by connexin45 in the mouse: impact on cardiac electrical conduction.

Authors:  Sébastien Alcoléa; Thérèse Jarry-Guichard; Jacques de Bakker; Daniel Gonzàlez; Wouter Lamers; Steven Coppen; Luis Barrio; Habo Jongsma; Daniel Gros; Harold van Rijen
Journal:  Circ Res       Date:  2003-11-20       Impact factor: 17.367

8.  Mice with podocyte-specific overexpression of wild type alpha-actinin-4 are healthy controls for K256E-alpha-actinin-4 mutant transgenic mice.

Authors:  Jean-Louis Michaud; Erin Stitt-Cavanaugh; Nicole Endlich; Karlhans Endlich; Yves De Repentigny; Rashmi Kothary; Chris R J Kennedy
Journal:  Transgenic Res       Date:  2009-07-08       Impact factor: 2.788

9.  Agouti C57BL/6N embryonic stem cells for mouse genetic resources.

Authors:  Stephen J Pettitt; Qi Liang; Xin Y Rairdan; Jennifer L Moran; Haydn M Prosser; David R Beier; Kent C Lloyd; Allan Bradley; William C Skarnes
Journal:  Nat Methods       Date:  2009-06-14       Impact factor: 28.547

10.  The European dimension for the mouse genome mutagenesis program.

Authors:  Johan Auwerx; Phil Avner; Richard Baldock; Andrea Ballabio; Rudi Balling; Mariano Barbacid; Anton Berns; Allan Bradley; Steve Brown; Peter Carmeliet; Pierre Chambon; Roger Cox; Duncan Davidson; Kay Davies; Denis Duboule; Jiri Forejt; Francesca Granucci; Nick Hastie; Martin Hrabé de Angelis; Ian Jackson; Dimitris Kioussis; George Kollias; Mark Lathrop; Urban Lendahl; Marcos Malumbres; Harald von Melchner; Werner Müller; Juha Partanen; Paola Ricciardi-Castagnoli; Peter Rigby; Barry Rosen; Nadia Rosenthal; Bill Skarnes; A Francis Stewart; Janet Thornton; Glauco Tocchini-Valentini; Erwin Wagner; Walter Wahli; Wolfgang Wurst
Journal:  Nat Genet       Date:  2004-09       Impact factor: 38.330

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  8 in total

1.  Managing major data of genetically modified mice: from scientific demands to legal obligations.

Authors:  Michael Staudt; Jürgen Trauth; Iris El Hindi; Claudia Galuschka; Dagmar Sitek; Johannes Schenkel
Journal:  Transgenic Res       Date:  2012-10       Impact factor: 2.788

2.  Expression of the human granulocyte-macrophage colony stimulating factor (hGM-CSF) gene under control of the 5'-regulatory sequence of the goat alpha-S1-casein gene with and without a MAR element in transgenic mice.

Authors:  I A Burkov; I A Serova; N R Battulin; A V Smirnov; I V Babkin; L E Andreeva; G A Dvoryanchikov; O L Serov
Journal:  Transgenic Res       Date:  2013-02-23       Impact factor: 2.788

Review 3.  Gene regulation and genetics in neurochemistry, past to future.

Authors:  Steven W Barger
Journal:  J Neurochem       Date:  2016-10-17       Impact factor: 5.372

4.  Unexpected phenotypic effects of a transgene integration causing a knockout of the endogenous Contactin-5 gene in mice.

Authors:  Alexander V Smirnov; Galina V Kontsevaya; Natalia A Feofanova; Margarita V Anisimova; Irina A Serova; Lyudmila A Gerlinskaya; Nariman R Battulin; Mikhail P Moshkin; Oleg L Serov
Journal:  Transgenic Res       Date:  2017-12-20       Impact factor: 2.788

5.  Clinical Chemistry Reference Intervals for C57BL/6J, C57BL/6N, and C3HeB/FeJ Mice (Mus musculus).

Authors:  Gordon P Otto; Birgit Rathkolb; Manuela A Oestereicher; Christoph J Lengger; Corinna Moerth; Kateryna Micklich; Helmut Fuchs; Valérie Gailus-Durner; Eckhard Wolf; Martin Hrabě de Angelis
Journal:  J Am Assoc Lab Anim Sci       Date:  2016       Impact factor: 1.232

6.  LasDB: A collective database for laboratory animal strain resources.

Authors:  Qi Kong; Chuan Qin
Journal:  Animal Model Exp Med       Date:  2018-11-28

Review 7.  Importing genetically altered animals: ensuring quality.

Authors:  M-C Birling; M D Fray; P Kasparek; J Kopkanova; M Massimi; R Matteoni; L Montoliu; L M J Nutter; M Raspa; J Rozman; E J Ryder; F Scavizzi; V Voikar; S Wells; G Pavlovic; L Teboul
Journal:  Mamm Genome       Date:  2021-09-18       Impact factor: 2.957

8.  Boundary sequences flanking the mouse tyrosinase locus ensure faithful pattern of gene expression.

Authors:  Davide Seruggia; Almudena Fernández; Marta Cantero; Ana Fernández-Miñán; José Luis Gomez-Skarmeta; Pawel Pelczar; Lluis Montoliu
Journal:  Sci Rep       Date:  2020-09-23       Impact factor: 4.379

  8 in total

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