Literature DB >> 20630332

Propensity score estimation: neural networks, support vector machines, decision trees (CART), and meta-classifiers as alternatives to logistic regression.

Daniel Westreich1, Justin Lessler, Michele Jonsson Funk.   

Abstract

OBJECTIVE: Propensity scores for the analysis of observational data are typically estimated using logistic regression. Our objective in this review was to assess machine learning alternatives to logistic regression, which may accomplish the same goals but with fewer assumptions or greater accuracy. STUDY DESIGN AND
SETTING: We identified alternative methods for propensity score estimation and/or classification from the public health, biostatistics, discrete mathematics, and computer science literature, and evaluated these algorithms for applicability to the problem of propensity score estimation, potential advantages over logistic regression, and ease of use.
RESULTS: We identified four techniques as alternatives to logistic regression: neural networks, support vector machines, decision trees (classification and regression trees [CART]), and meta-classifiers (in particular, boosting).
CONCLUSION: Although the assumptions of logistic regression are well understood, those assumptions are frequently ignored. All four alternatives have advantages and disadvantages compared with logistic regression. Boosting (meta-classifiers) and, to a lesser extent, decision trees (particularly CART), appear to be most promising for use in the context of propensity score analysis, but extensive simulation studies are needed to establish their utility in practice. Copyright (c) 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20630332      PMCID: PMC2907172          DOI: 10.1016/j.jclinepi.2009.11.020

Source DB:  PubMed          Journal:  J Clin Epidemiol        ISSN: 0895-4356            Impact factor:   6.437


  23 in total

Review 1.  Invited commentary: propensity scores.

Authors:  M M Joffe; P R Rosenbaum
Journal:  Am J Epidemiol       Date:  1999-08-15       Impact factor: 4.897

Review 2.  Principles for modeling propensity scores in medical research: a systematic literature review.

Authors:  Sherry Weitzen; Kate L Lapane; Alicia Y Toledano; Anne L Hume; Vincent Mor
Journal:  Pharmacoepidemiol Drug Saf       Date:  2004-12       Impact factor: 2.890

3.  Stratification and weighting via the propensity score in estimation of causal treatment effects: a comparative study.

Authors:  Jared K Lunceford; Marie Davidian
Journal:  Stat Med       Date:  2004-10-15       Impact factor: 2.373

Review 4.  Indications for propensity scores and review of their use in pharmacoepidemiology.

Authors:  Robert J Glynn; Sebastian Schneeweiss; Til Stürmer
Journal:  Basic Clin Pharmacol Toxicol       Date:  2006-03       Impact factor: 4.080

5.  Doubly robust estimation in missing data and causal inference models.

Authors:  Heejung Bang; James M Robins
Journal:  Biometrics       Date:  2005-12       Impact factor: 2.571

6.  Evaluating uses of data mining techniques in propensity score estimation: a simulation study.

Authors:  Soko Setoguchi; Sebastian Schneeweiss; M Alan Brookhart; Robert J Glynn; E Francis Cook
Journal:  Pharmacoepidemiol Drug Saf       Date:  2008-06       Impact factor: 2.890

7.  Support vector machines for spam categorization.

Authors:  H Drucker; D Wu; V N Vapnik
Journal:  IEEE Trans Neural Netw       Date:  1999

8.  COBEpro: a novel system for predicting continuous B-cell epitopes.

Authors:  Michael J Sweredoski; Pierre Baldi
Journal:  Protein Eng Des Sel       Date:  2008-12-10       Impact factor: 1.650

9.  Propensity score methods for bias reduction in the comparison of a treatment to a non-randomized control group.

Authors:  R B D'Agostino
Journal:  Stat Med       Date:  1998-10-15       Impact factor: 2.373

10.  Using clinical classification trees to identify individuals at risk of STDs during pregnancy.

Authors:  Trace S Kershaw; Jessica Lewis; Claire Westdahl; Yun F Wang; Sharon Schindler Rising; Zohar Massey; Jeannette Ickovics
Journal:  Perspect Sex Reprod Health       Date:  2007-09
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  83 in total

1.  Imputation approaches for potential outcomes in causal inference.

Authors:  Daniel Westreich; Jessie K Edwards; Stephen R Cole; Robert W Platt; Sunni L Mumford; Enrique F Schisterman
Journal:  Int J Epidemiol       Date:  2015-07-25       Impact factor: 7.196

2.  Delirium Prediction using Machine Learning Models on Preoperative Electronic Health Records Data.

Authors:  Anis Davoudi; Ashkan Ebadi; Parisa Rashidi; Tazcan Ozrazgat-Baslanti; Azra Bihorac; Alberto C Bursian
Journal:  Proc IEEE Int Symp Bioinformatics Bioeng       Date:  2018-01-11

3.  Model Misspecification When Excluding Instrumental Variables From PS Models in Settings Where Instruments Modify the Effects of Covariates on Treatment.

Authors:  Richard Wyss; Alan R Ellis; Mark Lunt; M Alan Brookhart; Robert J Glynn; Til Stürmer
Journal:  Epidemiol Methods       Date:  2014-12

4.  Maximum likelihood, profile likelihood, and penalized likelihood: a primer.

Authors:  Stephen R Cole; Haitao Chu; Sander Greenland
Journal:  Am J Epidemiol       Date:  2013-10-29       Impact factor: 4.897

5.  An empirical comparison of tree-based methods for propensity score estimation.

Authors:  Stephanie Watkins; Michele Jonsson-Funk; M Alan Brookhart; Steven A Rosenberg; T Michael O'Shea; Julie Daniels
Journal:  Health Serv Res       Date:  2013-05-23       Impact factor: 3.402

6.  Doubly robust estimation of causal effects.

Authors:  Michele Jonsson Funk; Daniel Westreich; Chris Wiesen; Til Stürmer; M Alan Brookhart; Marie Davidian
Journal:  Am J Epidemiol       Date:  2011-03-08       Impact factor: 4.897

7.  Improving propensity score estimators' robustness to model misspecification using super learner.

Authors:  Romain Pirracchio; Maya L Petersen; Mark van der Laan
Journal:  Am J Epidemiol       Date:  2014-12-16       Impact factor: 4.897

8.  Performing an Informatics Consult: Methods and Challenges.

Authors:  Alejandro Schuler; Alison Callahan; Kenneth Jung; Nigam H Shah
Journal:  J Am Coll Radiol       Date:  2018-02-13       Impact factor: 5.532

Review 9.  Propensity score methods to control for confounding in observational cohort studies: a statistical primer and application to endoscopy research.

Authors:  Jeff Y Yang; Michael Webster-Clark; Jennifer L Lund; Robert S Sandler; Evan S Dellon; Til Stürmer
Journal:  Gastrointest Endosc       Date:  2019-04-30       Impact factor: 9.427

10.  Veridical Causal Inference using Propensity Score Methods for Comparative Effectiveness Research with Medical Claims.

Authors:  Ryan D Ross; Xu Shi; Megan E V Caram; Pheobe A Tsao; Paul Lin; Amy Bohnert; Min Zhang; Bhramar Mukherjee
Journal:  Health Serv Outcomes Res Methodol       Date:  2020-10-20
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