Literature DB >> 2062855

DNA strand-specific mutations induced by (+/-)-3 alpha,4 beta-dihydroxy- 1 alpha,2 alpha-epoxy-1,2,3,4-tetrahydrobenzo[c]phenanthrene in the dihydrofolate reductase gene.

A M Carothers1, J Mucha, D Grunberger.   

Abstract

We previously showed that the preferred mutation induced by (+/-)-3 alpha,4 beta-dihydroxy-1 alpha,2 alpha-epoxy- 1,2,3,4-tetrahydrobenzo[c]phenanthrene (BcPHDE) in the dihydrofolate reductase gene in Chinese hamster ovary cells was a purine to thymine transversion on the nontranscribed strand at the sequence 5'-RRR-3' (R is a purine and the mutated base is underlined). To determine whether the observed mutational strand specificity was due to bias in the phenotypic selection, we designed a nonsense-codon reversion assay in which a triple purine target was present on both strands and all R----T transversion mutations yielded amino acid substitutions that were compatible with dihydrofolate reductase enzyme activity. From the size of the targets, a 2:1 ratio of mutations at the purines on the nontranscribed strand was expected if the DNA strands were mutationally equivalent. We isolated a total of 66 BcPHDE-induced revertants of two mutants that carry point mutations at either the 5' or the 3' end of the gene. All reversions at the 5' end arose by substitution on the nontranscribed strand; those at the 3' end showed a strand bias that favored this strand by 7:1. For both mutants, R----T transversions accounted for 88% of all the induced base changes. Thus, in this system, mutational strand bias is independent of the selection for phenotype. The results are consistent with the model of preferential repair of the transcribed strand as proposed by others. The involvement of RNA polymerase in the selective repair recruitment is discussed.

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Year:  1991        PMID: 2062855      PMCID: PMC51955          DOI: 10.1073/pnas.88.13.5749

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  RNA polymerase II subunit composition, stoichiometry, and phosphorylation.

Authors:  P A Kolodziej; N Woychik; S M Liao; R A Young
Journal:  Mol Cell Biol       Date:  1990-05       Impact factor: 4.272

2.  Point mutation analysis in a mammalian gene: rapid preparation of total RNA, PCR amplification of cDNA, and Taq sequencing by a novel method.

Authors:  A M Carothers; G Urlaub; J Mucha; D Grunberger; L A Chasin
Journal:  Biotechniques       Date:  1989-05       Impact factor: 1.993

3.  DNA base changes and RNA levels in N-acetoxy-2-acetylaminofluorene-induced dihydrofolate reductase mutants of Chinese hamster ovary cells.

Authors:  A M Carothers; R W Steigerwalt; G Urlaub; L A Chasin; D Grunberger
Journal:  J Mol Biol       Date:  1989-08-05       Impact factor: 5.469

4.  Conditional mutations occur predominantly in highly conserved residues of RNA polymerase II subunits.

Authors:  C Scafe; C Martin; M Nonet; S Podos; S Okamura; R A Young
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

5.  RNA polymerase II mutants defective in transcription of a subset of genes.

Authors:  C Scafe; M Nonet; R A Young
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

6.  DNA base changes in benzo[a]pyrene diol epoxide-induced dihydrofolate reductase mutants of Chinese hamster ovary cells.

Authors:  A M Carothers; D Grunberger
Journal:  Carcinogenesis       Date:  1990-01       Impact factor: 4.944

7.  Site-specific DNA repair at the nucleosome level in a yeast minichromosome.

Authors:  M J Smerdon; F Thoma
Journal:  Cell       Date:  1990-05-18       Impact factor: 41.582

8.  Nonsense mutations in the dihydrofolate reductase gene affect RNA processing.

Authors:  G Urlaub; P J Mitchell; C J Ciudad; L A Chasin
Journal:  Mol Cell Biol       Date:  1989-07       Impact factor: 4.272

9.  Intragenic and extragenic suppressors of mutations in the heptapeptide repeat domain of Saccharomyces cerevisiae RNA polymerase II.

Authors:  M L Nonet; R A Young
Journal:  Genetics       Date:  1989-12       Impact factor: 4.562

10.  Interactions between yeast photolyase and nucleotide excision repair proteins in Saccharomyces cerevisiae and Escherichia coli.

Authors:  G B Sancar; F W Smith
Journal:  Mol Cell Biol       Date:  1989-11       Impact factor: 4.272

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  10 in total

1.  Increased UV resistance of a xeroderma pigmentosum revertant cell line is correlated with selective repair of the transcribed strand of an expressed gene.

Authors:  L Lommel; P C Hanawalt
Journal:  Mol Cell Biol       Date:  1993-02       Impact factor: 4.272

Review 2.  Mechanisms of transcription-repair coupling and mutation frequency decline.

Authors:  C P Selby; A Sancar
Journal:  Microbiol Rev       Date:  1994-09

3.  Preferential repair and strand-specific repair of benzo[a]pyrene diol epoxide adducts in the HPRT gene of diploid human fibroblasts.

Authors:  R H Chen; V M Maher; J Brouwer; P van de Putte; J J McCormick
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

4.  Splicing mutants and their second-site suppressors at the dihydrofolate reductase locus in Chinese hamster ovary cells.

Authors:  A M Carothers; G Urlaub; D Grunberger; L A Chasin
Journal:  Mol Cell Biol       Date:  1993-08       Impact factor: 4.272

5.  DNA strand-specific repair of (+-)-3 alpha,4 beta-dihydroxy-1 alpha,2 alpha-epoxy-1,2,3,4-tetrahydrobenzo[c]phenanthrene adducts in the hamster dihydrofolate reductase gene.

Authors:  A M Carothers; W Zhen; J Mucha; Y J Zhang; R M Santella; D Grunberger; V A Bohr
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-15       Impact factor: 11.205

6.  Direct selection for mutations affecting specific splice sites in a hamster dihydrofolate reductase minigene.

Authors:  I T Chen; L A Chasin
Journal:  Mol Cell Biol       Date:  1993-01       Impact factor: 4.272

7.  Human RNA polymerase II is partially blocked by DNA adducts derived from tumorigenic benzo[c]phenanthrene diol epoxides: relating biological consequences to conformational preferences.

Authors:  Thomas M Schinecker; Rebecca A Perlow; Suse Broyde; Nicholas E Geacintov; David A Scicchitano
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

8.  Gene-specific and strand-specific DNA repair in the G1 and G2 phases of the cell cycle.

Authors:  L N Petersen; D K Orren; V A Bohr
Journal:  Mol Cell Biol       Date:  1995-07       Impact factor: 4.272

9.  Intragenomic repair heterogeneity of DNA damage.

Authors:  D A Scicchitano; P C Hanawalt
Journal:  Environ Health Perspect       Date:  1992-11       Impact factor: 9.031

10.  Early-onset liver cancer in South America associates with low hepatitis B virus DNA burden.

Authors:  Agnès Marchio; Juan Pablo Cerapio; Eloy Ruiz; Luis Cano; Sandro Casavilca; Benoît Terris; Eric Deharo; Anne Dejean; Stéphane Bertani; Pascal Pineau
Journal:  Sci Rep       Date:  2018-08-13       Impact factor: 4.379

  10 in total

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