Literature DB >> 20628546

LOCAL ORTHOGONAL CUTTING METHOD FOR COMPUTING MEDIAL CURVES AND ITS BIOMEDICAL APPLICATIONS.

Xiangmin Jiao1, Daniel R Einstein, Vladimir Dyedov.   

Abstract

Medial curves have a wide range of applications in geometric modeling and analysis (such as shape matching) and biomedical engineering (such as morphometry and computer assisted surgery). The computation of medial curves poses significant challenges, both in terms of theoretical analysis and practical efficiency and reliability. In this paper, we propose a definition and analysis of medial curves and also describe an efficient and robust method called local orthogonal cutting (LOC) for computing medial curves. Our approach is based on three key concepts: a local orthogonal decomposition of objects into substructures, a differential geometry concept called the interior center of curvature (ICC), and integrated stability and consistency tests. These concepts lend themselves to robust numerical techniques and result in an algorithm that is efficient and noise resistant. We illustrate the effectiveness and robustness of our approach with some highly complex, large-scale, noisy biomedical geometries derived from medical images, including lung airways and blood vessels. We also present comparisons of our method with some existing methods.

Entities:  

Year:  2010        PMID: 20628546      PMCID: PMC2901897          DOI: 10.1137/090767170

Source DB:  PubMed          Journal:  SIAM J Sci Comput        ISSN: 1064-8275            Impact factor:   2.373


  12 in total

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3.  Snake modeling and distance transform approach to vascular centerline extraction and quantification.

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4.  Prediction of altered endograft path during endovascular abdominal aortic aneurysm repair with the Gore Excluder.

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Journal:  J Vasc Surg       Date:  2005-04       Impact factor: 4.268

5.  A hybrid one-dimensional/Womersley model of pulsatile blood flow in the entire coronary arterial tree.

Authors:  Yunlong Huo; Ghassan S Kassab
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6.  Curve-skeleton properties, applications, and algorithms.

Authors:  Nicu D Cornea; Deborah Silver; Patrick Min
Journal:  IEEE Trans Vis Comput Graph       Date:  2007 May-Jun       Impact factor: 4.579

7.  Validation of image-based method for extraction of coronary morphometry.

Authors:  Thomas Wischgoll; Jenny Susana Choy; Erik L Ritman; Ghassan S Kassab
Journal:  Ann Biomed Eng       Date:  2008-01-29       Impact factor: 3.934

8.  A scaling law of vascular volume.

Authors:  Yunlong Huo; Ghassan S Kassab
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

9.  Quantitative models of the rat pulmonary arterial tree morphometry applied to hypoxia-induced arterial remodeling.

Authors:  Robert C Molthen; Kelly L Karau; Christopher A Dawson
Journal:  J Appl Physiol (1985)       Date:  2004-08-27

10.  An anisotropic scale-invariant unstructured mesh generator suitable for volumetric imaging data.

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  4 in total

1.  Branch-based model for the diameters of the pulmonary airways: accounting for departures from self-consistency and registration errors.

Authors:  Moni B Neradilek; Nayak L Polissar; Daniel R Einstein; Robb W Glenny; Kevin R Minard; James P Carson; Xiangmin Jiao; Richard E Jacob; Timothy C Cox; Edward M Postlethwait; Richard A Corley
Journal:  Anat Rec (Hoboken)       Date:  2012-04-24       Impact factor: 2.064

2.  Development of a rhesus monkey lung geometry model and application to particle deposition in comparison to humans.

Authors:  Bahman Asgharian; Owen Price; Gene McClellan; Rick Corley; Daniel R Einstein; Richard E Jacob; Jack Harkema; Stephan A Carey; Edward Schelegle; Dallas Hyde; Julia S Kimbell; Frederick J Miller
Journal:  Inhal Toxicol       Date:  2012-11       Impact factor: 2.724

3.  A Bidirectional Coupling Procedure Applied to Multiscale Respiratory Modeling.

Authors:  A P Kuprat; S Kabilan; J P Carson; R A Corley; D R Einstein
Journal:  J Comput Phys       Date:  2013-07       Impact factor: 3.553

4.  Comparative computational modeling of airflows and vapor dosimetry in the respiratory tracts of rat, monkey, and human.

Authors:  Richard A Corley; Senthil Kabilan; Andrew P Kuprat; James P Carson; Kevin R Minard; Richard E Jacob; Charles Timchalk; Robb Glenny; Sudhakar Pipavath; Timothy Cox; Christopher D Wallis; Richard F Larson; Michelle V Fanucchi; Edward M Postlethwait; Daniel R Einstein
Journal:  Toxicol Sci       Date:  2012-05-12       Impact factor: 4.849

  4 in total

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