Literature DB >> 20628473

Thermodynamic Origin of Prolyl Peptide Bond Isomers.

Eric S Eberhardt1, Stewart N Loh, Ronald T Raines.   

Abstract

The thermodynamic preference for the trans isomer of prolyl peptide bonds arises almost entirely from enthalpy in aqueous buffer and in toluene.

Entities:  

Year:  1993        PMID： 20628473      PMCID： PMC2902179          DOI： 10.1016/S0040-4039(00)93377-X

Source DB:  PubMed          Journal:  Tetrahedron Lett        ISSN： 0040-4039            Impact factor:   2.415


  10 in total

1.  Cis proline mutants of ribonuclease A. I. Thermal stability.

Authors:  D A Schultz; R L Baldwin
Journal:  Protein Sci       Date:  1992-07       Impact factor: 6.725

2.  Coupling between local structure and global stability of a protein: mutants of staphylococcal nuclease.

Authors:  A T Alexandrescu; A P Hinck; J L Markley
Journal:  Biochemistry       Date:  1990-05-15       Impact factor: 3.162

3.  Occurrence and role of cis peptide bonds in protein structures.

Authors:  D E Stewart; A Sarkar; J E Wampler
Journal:  J Mol Biol       Date:  1990-07-05       Impact factor: 5.469

4.  Solvent Effects on the Energetics of Prolyl Peptide Bond Isomerization.

Authors:  Eric S Eberhardt; Stewart N Loh; Andrew P Hinck; Ronald T Raines
Journal:  J Am Chem Soc       Date:  1992       Impact factor: 15.419

5.  Influences of solvent water on protein folding: free energies of solvation of cis and trans peptides are nearly identical.

Authors:  A Radzicka; L Pedersen; R Wolfenden
Journal:  Biochemistry       Date:  1988-06-14       Impact factor: 3.162

6.  Nuclear magnetic resonance studies of the acid-base chemistry of amino acids and peptides. II. Dependence of the acidity of the C-terminal carboxyl group on the conformation of the C-terminal peptide bond.

Authors:  C A Evans; D L Rabenstein
Journal:  J Am Chem Soc       Date:  1974-11-13       Impact factor: 15.419

7.  Evidence for cis peptide bonds in copolypeptides of glycine and proline.

Authors:  D A Torchia
Journal:  Biochemistry       Date:  1972-04-11       Impact factor: 3.162

8.  Location of proline derivatives in conformational space. I. Conformational calculations; optical activity and NMR experiments.

Authors:  V Madison; J Schellman
Journal:  Biopolymers       Date:  1970       Impact factor: 2.505

9.  A magnetization-transfer nuclear magnetic resonance study of the folding of staphylococcal nuclease.

Authors:  P A Evans; R A Kautz; R O Fox; C M Dobson
Journal:  Biochemistry       Date:  1989-01-10       Impact factor: 3.162

10.  A peptide model for proline isomerism in the unfolded state of staphylococcal nuclease.

Authors:  D P Raleigh; P A Evans; M Pitkeathly; C M Dobson
Journal:  J Mol Biol       Date:  1992-11-20       Impact factor: 5.469
  10 in total
  9 in total

1.  An electronic effect on protein structure.

Authors:  Matthew P Hinderaker; Ronald T Raines
Journal:  Protein Sci       Date:  2003-06       Impact factor: 6.725

2.  Stereoelectronic effects on polyproline conformation.

Authors:  Jia-Cherng Horng; Ronald T Raines
Journal:  Protein Sci       Date:  2006-01       Impact factor: 6.725

3.  Aromatic-proline interactions: electronically tunable CH/π interactions.

Authors:  Neal J Zondlo
Journal:  Acc Chem Res       Date:  2012-11-13       Impact factor: 22.384

4.  Inductive Effects on the Energetics of Prolyl Peptide Bond Isomerization: Implications for Collagen Folding and Stability.

Authors:  Eric S Eberhardt; Nicholas Panisik; Ronald T Raines
Journal:  J Am Chem Soc       Date:  1996       Impact factor: 15.419

5.  Amide-Amide and Amide-Water Hydrogen Bonds: Implications for Protein Folding and Stability.

Authors:  Eric S Eberhardt; Ronald T Raines
Journal:  J Am Chem Soc       Date:  1994-03-09       Impact factor: 15.419

6.  O-acylation of hydroxyproline residues: effect on peptide-bond isomerization and collagen stability.

Authors:  Cara L Jenkins; Alexander I McCloskey; Ilia A Guzei; Eric S Eberhardt; Ronald T Raines
Journal:  Biopolymers       Date:  2005       Impact factor: 2.505

7.  Replacing a single atom accelerates the folding of a protein and increases its thermostability.

Authors:  Ulrich Arnold; Ronald T Raines
Journal:  Org Biomol Chem       Date:  2016-07-12       Impact factor: 3.876

8.  Determination of effective potentials for the stretching of C(α) ⋯ C(α) virtual bonds in polypeptide chains for coarse-grained simulations of proteins from ab initio energy surfaces of N-methylacetamide and N-acetylpyrrolidine.

Authors:  Adam K Sieradzan; Harold A Scheraga; Adam Liwo
Journal:  J Chem Theory Comput       Date:  2012-02-24       Impact factor: 6.006

9.  Proline isomerization in the C-terminal region of HSP27.

Authors:  T Reid Alderson; Justin L P Benesch; Andrew J Baldwin
Journal:  Cell Stress Chaperones       Date:  2017-05-25       Impact factor: 3.667
  9 in total

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