Literature DB >> 20623198

Microbial communities to mitigate contamination of PAHs in soil--possibilities and challenges: a review.

F Fernández-Luqueño1, C Valenzuela-Encinas, R Marsch, C Martínez-Suárez, E Vázquez-Núñez, L Dendooven.   

Abstract

BACKGROUND, AIM, AND SCOPE: Although highly diverse and specialized prokaryotic and eukaryotic microbial communities in soil degrade polycyclic aromatic hydrocarbons (PAHs), most of these are removed slowly. This review will discuss the biotechnological possibilities to increase the microbial dissipation of PAHs from soil as well as the main biological and biotechnological challenges. DISCUSSION AND
CONCLUSIONS: Microorganism provides effective and economically feasible solutions for soil cleanup and restoration. However, when the PAHs contamination is greater than the microbial ability to dissipate them, then applying genetically modified microorganisms might help to remove the contaminant. Nevertheless, it is necessary to have a more holistic review of the different individual reactions that are simultaneously taking place in a microbial cell and of the interactions microorganism-microorganism, microorganism-plant, microorganism-soil, and microorganisms-PAHs. PERSPECTIVES: Elucidating the function of genes from the PAHs-polluted soil and the study in pure cultures of isolated PAHs-degrading organisms as well as the generation of microorganisms in the laboratory that will accelerate the dissipation of PAHs and their safe application in situ have not been studied extensively. There is a latent environmental risk when genetically engineered microorganisms are used to remedy PAHs-contaminated soil.

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Year:  2010        PMID: 20623198     DOI: 10.1007/s11356-010-0371-6

Source DB:  PubMed          Journal:  Environ Sci Pollut Res Int        ISSN: 0944-1344            Impact factor:   4.223


  128 in total

Review 1.  Cleaning up with genomics: applying molecular biology to bioremediation.

Authors:  Derek R Lovley
Journal:  Nat Rev Microbiol       Date:  2003-10       Impact factor: 60.633

2.  Dissipation of polycyclic aromatic hydrocarbons from soil added with manure or vermicompost.

Authors:  D Alvarez-Bernal; E L García-Díaz; S M Contreras-Ramos; L Dendooven
Journal:  Chemosphere       Date:  2006-03-31       Impact factor: 7.086

Review 3.  Use of genetically engineered microorganisms (GEMs) for the bioremediation of contaminants.

Authors:  Meltem Urgun-Demirtas; Benjamin Stark; Krishna Pagilla
Journal:  Crit Rev Biotechnol       Date:  2006 Jul-Sep       Impact factor: 8.429

4.  Degradation of phenanthrene and pyrene by Nematoloma frowardii.

Authors:  U Sack; M Hofrichter; W Fritsche
Journal:  J Basic Microbiol       Date:  1997       Impact factor: 2.281

5.  Biosurfactant production in sugar beet molasses by some Pseudomonas spp.

Authors:  Dilsad Onbasli; Belma Aslim
Journal:  J Environ Biol       Date:  2009-01

6.  Vibrio cyclotrophicus sp. nov., a polycyclic aromatic hydrocarbon (PAH)-degrading marine bacterium.

Authors:  B P Hedlund; J T Staley
Journal:  Int J Syst Evol Microbiol       Date:  2001-01       Impact factor: 2.747

7.  Bacterial communities and enzyme activities of PAHs polluted soils.

Authors:  V Andreoni; L Cavalca; M A Rao; G Nocerino; S Bernasconi; E Dell'Amico; M Colombo; L Gianfreda
Journal:  Chemosphere       Date:  2004-11       Impact factor: 7.086

8.  Biostimulation of micro-organisms from sugarcane bagasse pith for the removal of weathered hydrocarbon from soil.

Authors:  B Pèrez-Armendáriz; O Loera-Corral; L Fernández-Linares; F Esparza-García; R Rodríguez-Vázquez
Journal:  Lett Appl Microbiol       Date:  2004       Impact factor: 2.858

9.  Real-Time PCR quantification of PAH-ring hydroxylating dioxygenase (PAH-RHDalpha) genes from Gram positive and Gram negative bacteria in soil and sediment samples.

Authors:  Aurélie Cébron; Marie-Paule Norini; Thierry Beguiristain; Corinne Leyval
Journal:  J Microbiol Methods       Date:  2008-02-02       Impact factor: 2.363

10.  Isolation of the phe-operon from G. stearothermophilus comprising the phenol degradative meta-pathway genes and a novel transcriptional regulator.

Authors:  Bastian Omokoko; Uwe K Jäntges; Martin Zimmermann; Monika Reiss; Winfried Hartmeier
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  33 in total

1.  Superior photodecomposition of pyrene by metal ion-loaded TiO₂ catalyst under UV light irradiation.

Authors:  Malka Rani; Nidhi Gupta; Bonamali Pal
Journal:  Environ Sci Pollut Res Int       Date:  2012-07       Impact factor: 4.223

2.  Degradation of polycyclic aromatic hydrocarbons (PAHs) during Sphagnum litters decay.

Authors:  Zucheng Wang; Shasha Liu; Zhao-Jun Bu; Shengzhong Wang
Journal:  Environ Sci Pollut Res Int       Date:  2018-04-28       Impact factor: 4.223

3.  Diversity of active microbial communities subjected to long-term exposure to chemical contaminants along a 40-year-old sediment core.

Authors:  Assia Kaci; Fabienne Petit; Matthieu Fournier; Sébastien Cécillon; Dominique Boust; Patrick Lesueur; Thierry Berthe
Journal:  Environ Sci Pollut Res Int       Date:  2015-05-02       Impact factor: 4.223

4.  Abundance and diversity of functional genes involved in the degradation of aromatic hydrocarbons in Antarctic soils and sediments around Syowa Station.

Authors:  C Muangchinda; S Chavanich; V Viyakarn; K Watanabe; S Imura; A S Vangnai; O Pinyakong
Journal:  Environ Sci Pollut Res Int       Date:  2014-10-22       Impact factor: 4.223

Review 5.  Bioremediation treatment of hydrocarbon-contaminated Arctic soils: influencing parameters.

Authors:  Masoud Naseri; Abbas Barabadi; Javad Barabady
Journal:  Environ Sci Pollut Res Int       Date:  2014-06-07       Impact factor: 4.223

6.  Comparison of phenanthrene biodegradation by free and immobilized cell systems: formation of hydroxylated compounds.

Authors:  Ali Partovinia; Fereshteh Naeimpoor
Journal:  Environ Sci Pollut Res Int       Date:  2014-01-22       Impact factor: 4.223

7.  Correlations between PAH bioavailability, degrading bacteria, and soil characteristics during PAH biodegradation in five diffusely contaminated dissimilar soils.

Authors:  M Crampon; F Bureau; M Akpa-Vinceslas; J Bodilis; N Machour; F Le Derf; F Portet-Koltalo
Journal:  Environ Sci Pollut Res Int       Date:  2014-03-28       Impact factor: 4.223

8.  Insights into the genome and proteome of Sphingomonas paucimobilis strain 20006FA involved in the regulation of polycyclic aromatic hydrocarbon degradation.

Authors:  M Macchi; M Martinez; R M Neme Tauil; M P Valacco; I S Morelli; B M Coppotelli
Journal:  World J Microbiol Biotechnol       Date:  2017-12-06       Impact factor: 3.312

9.  A simple strategy for investigating the diversity and hydrocarbon degradation abilities of cultivable bacteria from contaminated soil.

Authors:  Maria Bučková; Andrea Puškarová; Katarína Chovanová; Lucia Kraková; Peter Ferianc; Domenico Pangallo
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10.  Exploring micromycetes biodiversity for screening benzo[a]pyrene degrading potential.

Authors:  Catherine Rafin; Bruno de Foucault; Etienne Veignie
Journal:  Environ Sci Pollut Res Int       Date:  2012-10-24       Impact factor: 4.223

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