Literature DB >> 20622064

Identification and heterologous expression of genes involved in anaerobic dissimilatory phosphite oxidation by Desulfotignum phosphitoxidans.

Diliana Dancheva Simeonova1, Marlena Marie Wilson, William W Metcalf, Bernhard Schink.   

Abstract

Desulfotignum phosphitoxidans is a strictly anaerobic, Gram-negative bacterium that utilizes phosphite as the sole electron source for homoacetogenic CO2 reduction or sulfate reduction. A genomic library of D. phosphitoxidans, constructed using the fosmid vector pJK050, was screened for clones harboring the genes involved in phosphite oxidation via PCR using primers developed based on the amino acid sequences of phosphite-induced proteins. Sequence analysis of two positive clones revealed a putative operon of seven genes predicted to be involved in phosphite oxidation. Four of these genes (ptxD-ptdFCG) were cloned and heterologously expressed in Desulfotignum balticum, a related strain that cannot use phosphite as either an electron donor or as a phosphorus source. The ptxD-ptdFCG gene cluster was sufficient to confer phosphite uptake and oxidation ability to the D. balticum host strain but did not allow use of phosphite as an electron donor for chemolithotrophic growth. Phosphite oxidation activity was measured in cell extracts of D. balticum transconjugants, suggesting that all genes required for phosphite oxidation were cloned. Genes of the phosphite gene cluster were assigned putative functions on the basis of sequence analysis and enzyme assays.

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Year:  2010        PMID: 20622064      PMCID: PMC2944520          DOI: 10.1128/JB.00541-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  31 in total

1.  Phosphite oxidation by sulphate reduction.

Authors:  B Schink; M Friedrich
Journal:  Nature       Date:  2000-07-06       Impact factor: 49.962

2.  Purification and characterization of a novel phosphorus-oxidizing enzyme from Pseudomonas stutzeri WM88.

Authors:  A M Costas; A K White; W W Metcalf
Journal:  J Biol Chem       Date:  2001-02-22       Impact factor: 5.157

3.  Improved prediction of signal peptides: SignalP 3.0.

Authors:  Jannick Dyrløv Bendtsen; Henrik Nielsen; Gunnar von Heijne; Søren Brunak
Journal:  J Mol Biol       Date:  2004-07-16       Impact factor: 5.469

4.  Reclassification of Desulfobacterium phenolicum as Desulfobacula phenolica comb. nov. and description of strain SaxT as Desulfotignum balticum gen. nov., sp. nov.

Authors:  J Kuever; M Könneke; A Galushko; O Drzyzga
Journal:  Int J Syst Evol Microbiol       Date:  2001-01       Impact factor: 2.747

5.  Desulfotignum phosphitoxidans sp. nov., a new marine sulfate reducer that oxidizes phosphite to phosphate.

Authors:  Bernhard Schink; Volker Thiemann; Heike Laue; Michael W Friedrich
Journal:  Arch Microbiol       Date:  2002-03-05       Impact factor: 2.552

Review 6.  Glycerol-3-phosphate transporter of Escherichia coli: structure, function and regulation.

Authors:  M Joanne Lemieux; Yafei Huang; Da-Neng Wang
Journal:  Res Microbiol       Date:  2004-10       Impact factor: 3.992

7.  The htx and ptx operons of Pseudomonas stutzeri WM88 are new members of the pho regulon.

Authors:  Andrea K White; William W Metcalf
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

8.  A new activity for an old enzyme: Escherichia coli bacterial alkaline phosphatase is a phosphite-dependent hydrogenase.

Authors:  Kechao Yang; William W Metcalf
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-17       Impact factor: 11.205

9.  Two C-P lyase operons in Pseudomonas stutzeri and their roles in the oxidation of phosphonates, phosphite, and hypophosphite.

Authors:  Andrea K White; William W Metcalf
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

10.  Relaxing the nicotinamide cofactor specificity of phosphite dehydrogenase by rational design.

Authors:  Ryan Woodyer; Wilfred A van der Donk; Huimin Zhao
Journal:  Biochemistry       Date:  2003-10-14       Impact factor: 3.162

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  10 in total

1.  Metagenomics-guided analysis of microbial chemolithoautotrophic phosphite oxidation yields evidence of a seventh natural CO2 fixation pathway.

Authors:  Israel A Figueroa; Tyler P Barnum; Pranav Y Somasekhar; Charlotte I Carlström; Anna L Engelbrektson; John D Coates
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-28       Impact factor: 11.205

2.  Life and death with arsenic. Arsenic life: an analysis of the recent report "A bacterium that can grow by using arsenic instead of phosphorus".

Authors:  Barry P Rosen; A Abdul Ajees; Timothy R McDermott
Journal:  Bioessays       Date:  2011-03-08       Impact factor: 4.345

3.  The diversity and evolution of microbial dissimilatory phosphite oxidation.

Authors:  Sophia D Ewens; Alexa F S Gomberg; Tyler P Barnum; Mikayla A Borton; Hans K Carlson; Kelly C Wrighton; John D Coates
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-16       Impact factor: 12.779

4.  Genome sequence of Shinella sp. strain DD12, isolated from homogenized guts of starved Daphnia magna.

Authors:  Anja Poehlein; Heike Freese; Rolf Daniel; Diliana D Simeonova
Journal:  Stand Genomic Sci       Date:  2016-02-09

5.  The molecular basis of phosphite and hypophosphite recognition by ABC-transporters.

Authors:  Claudine Bisson; Nathan B P Adams; Ben Stevenson; Amanda A Brindley; Despo Polyviou; Thomas S Bibby; Patrick J Baker; C Neil Hunter; Andrew Hitchcock
Journal:  Nat Commun       Date:  2017-11-23       Impact factor: 14.919

Review 6.  Modules for in vitro metabolic engineering: Pathway assembly for bio-based production of value-added chemicals.

Authors:  Hironori Taniguchi; Kenji Okano; Kohsuke Honda
Journal:  Synth Syst Biotechnol       Date:  2017-06-07

7.  Draft Genome Sequence of Desulfotignum phosphitoxidans DSM 13687 Strain FiPS-3.

Authors:  Anja Poehlein; Rolf Daniel; Diliana D Simeonova
Journal:  Genome Announc       Date:  2013-05-23

8.  Genome sequence of Pedobacter glucosidilyticus DD6b, isolated from zooplankton Daphnia magna.

Authors:  Anja Poehlein; Rolf Daniel; Diliana D Simeonova
Journal:  Stand Genomic Sci       Date:  2015-11-11

9.  Life based on phosphite: a genome-guided analysis of Desulfotignum phosphitoxidans.

Authors:  Anja Poehlein; Rolf Daniel; Bernhard Schink; Diliana D Simeonova
Journal:  BMC Genomics       Date:  2013-11-02       Impact factor: 3.969

10.  Draft Genome Sequence of Serratia sp. Strain DD3, Isolated from the Guts of Daphnia magna.

Authors:  Anja Poehlein; Heike M Freese; Rolf Daniel; Diliana D Simeonova
Journal:  Genome Announc       Date:  2014-09-11
  10 in total

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