Literature DB >> 20609411

Biochemical target isolation for novices: affinity-based strategies.

Shin-ichi Sato1, Asako Murata, Takashi Shirakawa, Motonari Uesugi.   

Abstract

Although a number of genomic and biochemical technologies are now used to elucidate the mechanisms of action of bioactive small molecules, affinity-based isolation of molecular targets is a classic, but still powerful, approach. This review highlights recent cases where biochemical isolation of target proteins of bioactive small molecules highlighted general strategies for a successful isolation and identification of molecular targets. This review is intended to be both an update on the most recent findings for those already active in the field of forward chemical genetics and a guide for scientists entering this burgeoning field.

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Year:  2010        PMID: 20609411     DOI: 10.1016/j.chembiol.2010.05.015

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  23 in total

1.  Synthesis of 'clickable' acylhomoserine lactone quorum sensing probes: unanticipated effects on mammalian cell activation.

Authors:  Amanda L Garner; Jing Yu; Anjali Kumari Struss; Colin A Lowery; Jie Zhu; Sook Kyung Kim; Junguk Park; Alexander V Mayorov; Gunnar F Kaufmann; Vladimir V Kravchenko; Kim D Janda
Journal:  Bioorg Med Chem Lett       Date:  2010-12-04       Impact factor: 2.823

2.  A mammalian functional-genetic approach to characterizing cancer therapeutics.

Authors:  Hai Jiang; Justin R Pritchard; Richard T Williams; Douglas A Lauffenburger; Michael T Hemann
Journal:  Nat Chem Biol       Date:  2010-12-26       Impact factor: 15.040

Review 3.  Biological targets and mechanisms of action of natural products from marine cyanobacteria.

Authors:  Lilibeth A Salvador-Reyes; Hendrik Luesch
Journal:  Nat Prod Rep       Date:  2015-03       Impact factor: 13.423

4.  Simultaneous elucidation of antibiotic mechanism of action and potency with high-throughput Fourier-transform infrared (FTIR) spectroscopy and machine learning.

Authors:  Bernardo Ribeiro da Cunha; Luís P Fonseca; Cecília R C Calado
Journal:  Appl Microbiol Biotechnol       Date:  2021-01-14       Impact factor: 4.813

5.  Importance of a 4-Alkyl Substituent for Activity in the Englerin Series.

Authors:  Daniel C Elliott; John A Beutler; Kathlyn A Parker
Journal:  ACS Med Chem Lett       Date:  2017-06-06       Impact factor: 4.345

6.  Fluorescent Probes for Subcellular Localization during Osteclast Formation.

Authors:  Jing Wu; Qi Shen; Yue Wang; Dan Zhao; Chen Peng; Jian-Xin Li
Journal:  ACS Med Chem Lett       Date:  2014-06-11       Impact factor: 4.345

Review 7.  Chalcone: A Privileged Structure in Medicinal Chemistry.

Authors:  Chunlin Zhuang; Wen Zhang; Chunquan Sheng; Wannian Zhang; Chengguo Xing; Zhenyuan Miao
Journal:  Chem Rev       Date:  2017-05-10       Impact factor: 60.622

8.  Identifying novel targets in renal cell carcinoma: design and synthesis of affinity chromatography reagents.

Authors:  Muriel Bonnet; Jack U Flanagan; Denise A Chan; Amato J Giaccia; Michael P Hay
Journal:  Bioorg Med Chem       Date:  2013-12-20       Impact factor: 3.641

9.  Total synthesis and biological evaluation of tyroscherin.

Authors:  Hyun Seop Tae; John Hines; Ashley R Schneekloth; Craig M Crews
Journal:  Org Lett       Date:  2010-10-01       Impact factor: 6.005

Review 10.  Target deconvolution techniques in modern phenotypic profiling.

Authors:  Jiyoun Lee; Matthew Bogyo
Journal:  Curr Opin Chem Biol       Date:  2013-01-18       Impact factor: 8.822

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