Literature DB >> 20608641

Discrimination of saturated aldehydes by the rat I7 olfactory receptor.

Michael D Kurland1, Michael B Newcomer, Zita Peterlin, Kevin Ryan, Stuart Firestein, Victor S Batista.   

Abstract

The discrimination of n-alkyl-saturated aldehydes during the early stage of odorant recognition by the rat I7 olfactory receptor (OR-I7) is investigated. The concentrations of odorants necessary for 50% activation (or inhibition) of the OR-I7 are measured by calcium imaging recordings of dissociated rat olfactory sensory neurons, expressing the recombinant OR-I7 from an adenoviral vector. These are correlated with the corresponding binding free energies computed for a homology structural model of the OR-I7 built from the crystal structure of bovine visual rhodopsin at 2.2 A resolution.

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Year:  2010        PMID: 20608641      PMCID: PMC2912408          DOI: 10.1021/bi100976w

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  27 in total

1.  Evolution of olfactory receptor genes in the human genome.

Authors:  Yoshihito Niimura; Masatoshi Nei
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-24       Impact factor: 11.205

2.  QM/MM study of energy storage and molecular rearrangements due to the primary event in vision.

Authors:  Jose A Gascon; Victor S Batista
Journal:  Biophys J       Date:  2004-08-31       Impact factor: 4.033

3.  The retinal conformation and its environment in rhodopsin in light of a new 2.2 A crystal structure.

Authors:  Tetsuji Okada; Minoru Sugihara; Ana-Nicoleta Bondar; Marcus Elstner; Peter Entel; Volker Buss
Journal:  J Mol Biol       Date:  2004-09-10       Impact factor: 5.469

4.  A Self-Consistent Space-Domain Decomposition Method for QM/MM Computations of Protein Electrostatic Potentials.

Authors:  Jose A Gascon; Siegfried S F Leung; Enrique R Batista; Victor S Batista
Journal:  J Chem Theory Comput       Date:  2006-01       Impact factor: 6.006

5.  Computational studies of the primary phototransduction event in visual rhodopsin.

Authors:  José A Gascón; Eduardo M Sproviero; Victor S Batista
Journal:  Acc Chem Res       Date:  2006-03       Impact factor: 22.384

6.  Functional expression of a mammalian odorant receptor.

Authors:  H Zhao; L Ivic; J M Otaki; M Hashimoto; K Mikoshiba; S Firestein
Journal:  Science       Date:  1998-01-09       Impact factor: 47.728

7.  Aqueous cyanohydridoborate reduction of the rhodopsin chromophore.

Authors:  R S Fager; P Sejnowski; E W Abrahamson
Journal:  Biochem Biophys Res Commun       Date:  1972-06-09       Impact factor: 3.575

8.  Potential ligand-binding residues in rat olfactory receptors identified by correlated mutation analysis.

Authors:  M S Singer; L Oliveira; G Vriend; G M Shepherd
Journal:  Receptors Channels       Date:  1995

9.  Analysis of the molecular basis for octanal interactions in the expressed rat 17 olfactory receptor.

Authors:  M S Singer
Journal:  Chem Senses       Date:  2000-04       Impact factor: 3.160

Review 10.  Evolutionary dynamics of olfactory and other chemosensory receptor genes in vertebrates.

Authors:  Yoshihito Niimura; Masatoshi Nei
Journal:  J Hum Genet       Date:  2006-04-11       Impact factor: 3.172

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  13 in total

Review 1.  Modeling of mammalian olfactory receptors and docking of odorants.

Authors:  Guillaume Launay; Guenhaël Sanz; Edith Pajot-Augy; Jean-François Gibrat
Journal:  Biophys Rev       Date:  2012-09-01

2.  QM/MM model of the mouse olfactory receptor MOR244-3 validated by site-directed mutagenesis experiments.

Authors:  Sivakumar Sekharan; Mehmed Z Ertem; Hanyi Zhuang; Eric Block; Hiroaki Matsunami; Ruina Zhang; Jennifer N Wei; Yi Pan; Victor S Batista
Journal:  Biophys J       Date:  2014-09-02       Impact factor: 4.033

3.  Structural determinants of a conserved enantiomer-selective carvone binding pocket in the human odorant receptor OR1A1.

Authors:  Christiane Geithe; Jonas Protze; Franziska Kreuchwig; Gerd Krause; Dietmar Krautwurst
Journal:  Cell Mol Life Sci       Date:  2017-06-27       Impact factor: 9.261

4.  Carbon chain shape selectivity by the mouse olfactory receptor OR-I7.

Authors:  Min Ting Liu; Jianghai Ho; Jason Karl Liu; Radhanath Purakait; Uriel N Morzan; Lucky Ahmed; Victor S Batista; Hiroaki Matsunami; Kevin Ryan
Journal:  Org Biomol Chem       Date:  2018-04-04       Impact factor: 3.876

Review 5.  The long tale of the calcium activated Cl- channels in olfactory transduction.

Authors:  Michele Dibattista; Simone Pifferi; Anna Boccaccio; Anna Menini; Johannes Reisert
Journal:  Channels (Austin)       Date:  2017-03-16       Impact factor: 2.581

6.  Molecular mechanism of activation of human musk receptors OR5AN1 and OR1A1 by (R)-muscone and diverse other musk-smelling compounds.

Authors:  Lucky Ahmed; Yuetian Zhang; Eric Block; Michael Buehl; Michael J Corr; Rodrigo A Cormanich; Sivaji Gundala; Hiroaki Matsunami; David O'Hagan; Mehmet Ozbil; Yi Pan; Sivakumar Sekharan; Nicholas Ten; Mingan Wang; Mingyan Yang; Qingzhi Zhang; Ruina Zhang; Victor S Batista; Hanyi Zhuang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-09       Impact factor: 11.205

7.  Galantamine improves olfactory learning in the Ts65Dn mouse model of Down syndrome.

Authors:  Fabio M Simoes de Souza; Nicolas Busquet; Megan Blatner; Kenneth N Maclean; Diego Restrepo
Journal:  Sci Rep       Date:  2011-11-02       Impact factor: 4.379

8.  Aldehyde recognition and discrimination by mammalian odorant receptors via functional group-specific hydration chemistry.

Authors:  Yadi Li; Zita Peterlin; Jianghai Ho; Tali Yarnitzky; Min Ting Liu; Merav Fichman; Masha Y Niv; Hiroaki Matsunami; Stuart Firestein; Kevin Ryan
Journal:  ACS Chem Biol       Date:  2014-09-11       Impact factor: 5.100

9.  Computational Approaches for Decoding Select Odorant-Olfactory Receptor Interactions Using Mini-Virtual Screening.

Authors:  K Harini; Ramanathan Sowdhamini
Journal:  PLoS One       Date:  2015-07-29       Impact factor: 3.240

Review 10.  The state of the art of odorant receptor deorphanization: a report from the orphanage.

Authors:  Zita Peterlin; Stuart Firestein; Matthew E Rogers
Journal:  J Gen Physiol       Date:  2014-04-14       Impact factor: 4.086

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