Literature DB >> 20606274

Crystallization and preliminary X-ray crystallographic analysis of BxlA, an intracellular beta-D-xylosidase from Streptomyces thermoviolaceus OPC-520.

Hideaki Morioka1, Yasuhiro Miki, Kei Saito, Koji Tomoo, Toshimasa Ishida, Tomokazu Hasegawa, Akihito Yamano, Chiaki Takada, Katsushiro Miyamoto, Hiroshi Tsujibo.   

Abstract

BxlA from Streptomyces thermoviolaceus OPC-520, together with the extracellular BxlE and the integral membrane proteins BxlF and BxlG, constitutes a xylanolytic system that participates in the intracellular transport of xylan-degradation products and the production of xylose. To elucidate the mechanism of the hydrolytic degradation of xylooligosaccharides to xylose at the atomic level, X-ray structural analysis of BxlA was attempted. The recombinant BxlA protein (molecular weight 82 kDa) was crystallized by the hanging-drop vapour-diffusion method at 289 K. The crystals belonged to the monoclinic space group C2, with unit-cell parameters a = 142.2, b = 129.5, c = 101.4 A, beta = 119.8 degrees , and contained two molecules per asymmetric unit (V(M) = 2.47 A(3) Da(-1)). Diffraction data were collected to a resolution to 2.50 A and provided a data set with an overall R(merge) of 8.3%.

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Year:  2010        PMID: 20606274      PMCID: PMC2898462          DOI: 10.1107/S1744309110013400

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  9 in total

1.  The finer things in X-ray diffraction data collection.

Authors:  J W Pflugrath
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-10

2.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

3.  Crystallization and preliminary X-ray crystallographic analysis of BxlE, a xylobiose transporter from Streptomyces thermoviolaceus OPC-520.

Authors:  Kiho Seike; Junji Sato; Koji Tomoo; Toshimasa Ishida; Akihito Yamano; Sadao Ikenishi; Katsushiro Miyamoto; Hiroshi Tsujibo
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-06-11

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Three-dimensional structure of a barley beta-D-glucan exohydrolase, a family 3 glycosyl hydrolase.

Authors:  J N Varghese; M Hrmova; G B Fincher
Journal:  Structure       Date:  1999-02-15       Impact factor: 5.006

6.  Cloning, sequencing, and expression of the gene encoding an intracellular beta-D-xylosidase from Streptomyces thermoviolaceus OPC-520.

Authors:  H Tsujibo; C Takada; A Tsuji; M Kosaka; K Miyamoto; Y Inamori
Journal:  Biosci Biotechnol Biochem       Date:  2001-08       Impact factor: 2.043

7.  Cloning and sequence analysis of genes encoding xylanases and acetyl xylan esterase from Streptomyces thermoviolaceus OPC-520.

Authors:  H Tsujibo; T Ohtsuki; T Iio; I Yamazaki; K Miyamoto; M Sugiyama; Y Inamori
Journal:  Appl Environ Microbiol       Date:  1997-02       Impact factor: 4.792

8.  Purification, properties, and partial amino acid sequences of thermostable xylanases from Streptomyces thermoviolaceus OPC-520.

Authors:  H Tsujibo; K Miyamoto; T Kuda; K Minami; T Sakamoto; T Hasegawa; Y Inamori
Journal:  Appl Environ Microbiol       Date:  1992-01       Impact factor: 4.792

9.  Molecular characterization of a high-affinity xylobiose transporter of Streptomyces thermoviolaceus OPC-520 and its transcriptional regulation.

Authors:  Hiroshi Tsujibo; Mitsuo Kosaka; Sadao Ikenishi; Takaji Sato; Katsushiro Miyamoto; Yoshihiko Inamori
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

  9 in total
  1 in total

1.  Functional Characterization of Corynebacterium alkanolyticum β-Xylosidase and Xyloside ABC Transporter in Corynebacterium glutamicum.

Authors:  Akira Watanabe; Kazumi Hiraga; Masako Suda; Hideaki Yukawa; Masayuki Inui
Journal:  Appl Environ Microbiol       Date:  2015-04-10       Impact factor: 4.792

  1 in total

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