Literature DB >> 17620710

Crystallization and preliminary X-ray crystallographic analysis of BxlE, a xylobiose transporter from Streptomyces thermoviolaceus OPC-520.

Kiho Seike1, Junji Sato, Koji Tomoo, Toshimasa Ishida, Akihito Yamano, Sadao Ikenishi, Katsushiro Miyamoto, Hiroshi Tsujibo.   

Abstract

Together with the integral membrane proteins BxlF and BxlG, BxlE isolated from Streptomyces thermoviolaceus OPC-520 forms an ATP-binding cassette (ABC) transport system that mediates the uptake of xylan. To clarify the structural basis of sugar binding by BxlE at the atomic level, recombinant BxlE was crystallized using the hanging-drop vapour-diffusion method at 290 K. The crystals belonged to the monoclinic space group P2(1), with unit-cell parameters a = 44.63, b = 63.27, c = 66.40 A, beta = 103.05 degrees, and contained one 48 kDa molecule per asymmetric unit (V(M) = 1.96 A3 Da(-1)). Diffraction data collected to a resolution of 1.65 A using a rotating-anode X-ray source gave a data set with an overall R(merge) of 2.6% and a completeness of 91.3%. A data set from a platinum derivative is being used for phasing by the SAD method.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17620710      PMCID: PMC2335139          DOI: 10.1107/S1744309107024906

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  15 in total

1.  Cloning and expression of an alpha-L-arabinofuranosidase gene (stxIV) from Streptomyces thermoviolaceus OPC-520, and characterization of the enzyme.

Authors:  Hiroshi Tsujibo; Chiaki Takada; Yoshiko Wakamatsu; Mitsuo Kosaka; Akihiko Tsuji; Katsushiro Miyamoto; Yoshihiko Inamori
Journal:  Biosci Biotechnol Biochem       Date:  2002-02       Impact factor: 2.043

Review 2.  Actinomycetes as agents of biodegradation in the environment--a review.

Authors:  A J McCarthy; S T Williams
Journal:  Gene       Date:  1992-06-15       Impact factor: 3.688

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  Arabinoxylan degradation by fungi: characterization of the arabinoxylan-arabinofuranohydrolase encoding genes from Aspergillus niger and Aspergillus tubingensis.

Authors:  M M Gielkens; J Visser; L H de Graaff
Journal:  Curr Genet       Date:  1997-01       Impact factor: 3.886

5.  Cloning and sequence analysis of genes encoding xylanases and acetyl xylan esterase from Streptomyces thermoviolaceus OPC-520.

Authors:  H Tsujibo; T Ohtsuki; T Iio; I Yamazaki; K Miyamoto; M Sugiyama; Y Inamori
Journal:  Appl Environ Microbiol       Date:  1997-02       Impact factor: 4.792

6.  beta-Xylosidase activity, encoded by xlnD, is essential for complete hydrolysis of xylan by Aspergillus niger but not for induction of the xylanolytic enzyme spectrum.

Authors:  N N van Peij; J Brinkmann; M Vrsanská; J Visser; L H de Graaff
Journal:  Eur J Biochem       Date:  1997-04-01

7.  Characterization and sequence of a Thermomonospora fusca xylanase.

Authors:  D Irwin; E D Jung; D B Wilson
Journal:  Appl Environ Microbiol       Date:  1994-03       Impact factor: 4.792

8.  Molecular characterization of a high-affinity xylobiose transporter of Streptomyces thermoviolaceus OPC-520 and its transcriptional regulation.

Authors:  Hiroshi Tsujibo; Mitsuo Kosaka; Sadao Ikenishi; Takaji Sato; Katsushiro Miyamoto; Yoshihiko Inamori
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

9.  Molecular cloning of multiple xylanase genes from Pseudomonas fluorescens subsp. cellulosa.

Authors:  H J Gilbert; D A Sullivan; G Jenkins; L E Kellett; N P Minton; J Hall
Journal:  J Gen Microbiol       Date:  1988-12

10.  Automated main-chain model building by template matching and iterative fragment extension.

Authors:  Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-12-19
View more
  1 in total

1.  Crystallization and preliminary X-ray crystallographic analysis of BxlA, an intracellular beta-D-xylosidase from Streptomyces thermoviolaceus OPC-520.

Authors:  Hideaki Morioka; Yasuhiro Miki; Kei Saito; Koji Tomoo; Toshimasa Ishida; Tomokazu Hasegawa; Akihito Yamano; Chiaki Takada; Katsushiro Miyamoto; Hiroshi Tsujibo
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-06-24
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.