Literature DB >> 20599611

Understanding patterns of use and scientific opportunities in the emerging global microbial commons.

Lenie Dijkshoorn1, Paul De Vos, Tom Dedeurwaerdere.   

Abstract

Rapidly growing global networking has induced and supported an increased interest in the life sciences in such general issues as health, climate change, food security and biodiversity. Therefore, the need to address and share research data and materials in a systematic way emerged almost simultaneously. This movement has been described as the so-called global research commons. Also in microbiology, where the sharing of microbiological materials is a key issue, microbial commons is attracting attention. Microbiology is currently facing great challenges with the advances of high throughput screening and next-generation whole genome sequencing. Furthermore, the exploration and use of microorganisms in agriculture and food production are increasing so as to safeguard global food and feed production. Further to several meetings on the subject, a special issue of Research in Microbiology is dedicated to Microbial Research Commons with a series of reviews elaborating its major pay-offs and needs in basic and applied microbiology. This paper gives an introduction to these articles covering a range of topics. These include the role of public culture collections and biological resource centers and legal aspects in the exchange of materials, microbial classification, an internet-based platform for data-sharing, applications in agriculture and food production, and challenges in metagenomics and extremophile research. (c) 2010 Elsevier Masson SAS. All rights reserved.

Mesh:

Year:  2010        PMID: 20599611     DOI: 10.1016/j.resmic.2010.06.001

Source DB:  PubMed          Journal:  Res Microbiol        ISSN: 0923-2508            Impact factor:   3.992


  5 in total

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Authors:  Vittorio Capozzi; Giuseppe Spano; Daniela Fiocco
Journal:  J Microbiol Biol Educ       Date:  2012-05-03

Review 2.  Public Microbial Resource Centers: Key Hubs for Findable, Accessible, Interoperable, and Reusable (FAIR) Microorganisms and Genetic Materials.

Authors:  P Becker; M Bosschaerts; P Chaerle; H-M Daniel; A Hellemans; A Olbrechts; L Rigouts; A Wilmotte; M Hendrickx
Journal:  Appl Environ Microbiol       Date:  2019-10-16       Impact factor: 4.792

3.  Food microbial biodiversity and "microbes of protected origin".

Authors:  Vittorio Capozzi; Giuseppe Spano
Journal:  Front Microbiol       Date:  2011-11-28       Impact factor: 5.640

4.  Global scientific research commons under the Nagoya Protocol: Towards a collaborative economy model for the sharing of basic research assets.

Authors:  Tom Dedeurwaerdere; Paolo Melindi-Ghidi; Arianna Broggiato
Journal:  Environ Sci Policy       Date:  2016-01       Impact factor: 5.581

5.  Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains.

Authors:  Nikos C Kyrpides; Philip Hugenholtz; Jonathan A Eisen; Tanja Woyke; Markus Göker; Charles T Parker; Rudolf Amann; Brian J Beck; Patrick S G Chain; Jongsik Chun; Rita R Colwell; Antoine Danchin; Peter Dawyndt; Tom Dedeurwaerdere; Edward F DeLong; John C Detter; Paul De Vos; Timothy J Donohue; Xiu-Zhu Dong; Dusko S Ehrlich; Claire Fraser; Richard Gibbs; Jack Gilbert; Paul Gilna; Frank Oliver Glöckner; Janet K Jansson; Jay D Keasling; Rob Knight; David Labeda; Alla Lapidus; Jung-Sook Lee; Wen-Jun Li; Juncai Ma; Victor Markowitz; Edward R B Moore; Mark Morrison; Folker Meyer; Karen E Nelson; Moriya Ohkuma; Christos A Ouzounis; Norman Pace; Julian Parkhill; Nan Qin; Ramon Rossello-Mora; Johannes Sikorski; David Smith; Mitch Sogin; Rick Stevens; Uli Stingl; Ken-Ichiro Suzuki; Dorothea Taylor; Jim M Tiedje; Brian Tindall; Michael Wagner; George Weinstock; Jean Weissenbach; Owen White; Jun Wang; Lixin Zhang; Yu-Guang Zhou; Dawn Field; William B Whitman; George M Garrity; Hans-Peter Klenk
Journal:  PLoS Biol       Date:  2014-08-05       Impact factor: 8.029

  5 in total

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