Literature DB >> 20593459

Toward fully synthetic, homogeneous glycoproteins: advances in chemical ligation.

Yu Yuan1, Jin Chen, Qian Wan, Rebecca M Wilson, Samuel J Danishefsky.   

Abstract

Traditionally, in the pharma sciences, there has been an unstated but operative bifurcation into small molecules and biologics. Small molecules were seen to be, at the discovery level, in the province of chemistry, based on targets provided through biology. By contrast, "biologics" were seen to arise solely from the province of biology exploiting its accessible replicative mechanisms. Our laboratory has been dedicated to the proposition that explosive advances in chemical synthesis have been such as to render so called "biologics" as being accessible to chemical synthesis. In this article, we focus particularly on the area of glycopeptides. Chemical synthesis, in principle, offers an advantage, in that it can lead to homogeneous glycopeptides characterized by a single glycoform of the glycosidic domain mounted at a particular amino acid in the polypeptide domain. In support of this defining goal, a variety of new methods have been developed. The key problem addressed is that of ligation. In this article, we review how insights available from mechanistic organic chemistry have been used to create an imposing framework for the synthesis of structures which would, in an earlier day, have been seen to be strictly in the realm of chemically inaccessible "biologics". Copyright (c) 2010 Wiley Periodicals, Inc.

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Year:  2010        PMID: 20593459      PMCID: PMC2902596          DOI: 10.1002/bip.21374

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  12 in total

1.  Toward fully synthetic glycoproteins by ultimately convergent routes: a solution to a long-standing problem.

Authors:  J David Warren; Justin S Miller; Stacy J Keding; Samuel J Danishefsky
Journal:  J Am Chem Soc       Date:  2004-06-02       Impact factor: 15.419

2.  Studies related to the relative thermodynamic stability of C-terminal peptidyl esters of O-hydroxy thiophenol: emergence of a doable strategy for non-cysteine ligation applicable to the chemical synthesis of glycopeptides.

Authors:  Gong Chen; J David Warren; Jiehao Chen; Bin Wu; Qian Wan; Samuel J Danishefsky
Journal:  J Am Chem Soc       Date:  2006-06-14       Impact factor: 15.419

3.  Free-radical-based, specific desulfurization of cysteine: a powerful advance in the synthesis of polypeptides and glycopolypeptides.

Authors:  Qian Wan; Samuel J Danishefsky
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

4.  Development of efficient methods for accomplishing cysteine-free peptide and glycopeptide coupling.

Authors:  Gong Chen; Qian Wan; Zhongping Tan; Cindy Kan; Zihao Hua; Krishnakumar Ranganathan; Samuel J Danishefsky
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

5.  Native chemical ligation at valine: a contribution to peptide and glycopeptide synthesis.

Authors:  Jin Chen; Qian Wan; Yu Yuan; Jianglong Zhu; Samuel J Danishefsky
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

6.  Toward homogeneous erythropoietin: fine tuning of the C-terminal acyl donor in the chemical synthesis of the Cys29-Gly77 glycopeptide domain.

Authors:  Yu Yuan; Jin Chen; Qian Wan; Zhongping Tan; Gong Chen; Cindy Kan; Samuel J Danishefsky
Journal:  J Am Chem Soc       Date:  2009-04-22       Impact factor: 15.419

7.  Oxo-ester mediated native chemical ligation: concept and applications.

Authors:  Qian Wan; Jin Chen; Yu Yuan; Samuel J Danishefsky
Journal:  J Am Chem Soc       Date:  2008-11-26       Impact factor: 15.419

8.  Synthesis of proteins by native chemical ligation.

Authors:  P E Dawson; T W Muir; I Clark-Lewis; S B Kent
Journal:  Science       Date:  1994-11-04       Impact factor: 47.728

9.  Toward homogeneous erythropoietin: chemical synthesis of the Ala1-Gly28 glycopeptide domain by "alanine" ligation.

Authors:  Cindy Kan; John D Trzupek; Bin Wu; Qian Wan; Gong Chen; Zhongping Tan; Yu Yuan; Samuel J Danishefsky
Journal:  J Am Chem Soc       Date:  2009-04-22       Impact factor: 15.419

10.  Peptide segment coupling in aqueous medium: silver ion activation of the thiolcarboxyl group.

Authors:  J Blake
Journal:  Int J Pept Protein Res       Date:  1981-02
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  16 in total

Review 1.  Emerging technologies for making glycan-defined glycoproteins.

Authors:  Lai-Xi Wang; Joseph V Lomino
Journal:  ACS Chem Biol       Date:  2011-12-14       Impact factor: 5.100

Review 2.  Histones: at the crossroads of peptide and protein chemistry.

Authors:  Manuel M Müller; Tom W Muir
Journal:  Chem Rev       Date:  2014-10-20       Impact factor: 60.622

Review 3.  A fascinating journey into history: exploration of the world of isonitriles en route to complex amides.

Authors:  Rebecca M Wilson; Jennifer L Stockdill; Xiangyang Wu; Xuechen Li; Paul A Vadola; Peter K Park; Ping Wang; Samuel J Danishefsky
Journal:  Angew Chem Int Ed Engl       Date:  2012-02-24       Impact factor: 15.336

Review 4.  Rethinking amide bond synthesis.

Authors:  Vijaya R Pattabiraman; Jeffrey W Bode
Journal:  Nature       Date:  2011-12-21       Impact factor: 49.962

5.  Endo-F3 Glycosynthase Mutants Enable Chemoenzymatic Synthesis of Core-fucosylated Triantennary Complex Type Glycopeptides and Glycoproteins.

Authors:  John P Giddens; Joseph V Lomino; Mohammed N Amin; Lai-Xi Wang
Journal:  J Biol Chem       Date:  2016-03-10       Impact factor: 5.157

Review 6.  Chemical and chemoenzymatic synthesis of glycoproteins for deciphering functions.

Authors:  Lai-Xi Wang; Mohammed N Amin
Journal:  Chem Biol       Date:  2014-01-16

Review 7.  Chemoenzymatic Methods for the Synthesis of Glycoproteins.

Authors:  Chao Li; Lai-Xi Wang
Journal:  Chem Rev       Date:  2018-08-24       Impact factor: 60.622

8.  A two-step enzymatic glycosylation of polypeptides with complex N-glycans.

Authors:  Joseph V Lomino; Andreas Naegeli; Jared Orwenyo; Mohammed N Amin; Markus Aebi; Lai-Xi Wang
Journal:  Bioorg Med Chem       Date:  2013-02-18       Impact factor: 3.641

9.  Hydrogels Formed by Oxo-ester Mediated Native Chemical Ligation.

Authors:  Iossif Strehin; Dmitri Gourevitch; Yong Zhang; Ellen Heber-Katz; Phillip B Messersmith
Journal:  Biomater Sci       Date:  2013-06-01       Impact factor: 6.843

10.  Chemical synthesis of highly congested gp120 V1V2 N-glycopeptide antigens for potential HIV-1-directed vaccines.

Authors:  Baptiste Aussedat; Yusuf Vohra; Peter K Park; Alberto Fernández-Tejada; S Munir Alam; S Moses Dennison; Frederick H Jaeger; Kara Anasti; Shelley Stewart; Julie H Blinn; Hua-Xin Liao; Joseph G Sodroski; Barton F Haynes; Samuel J Danishefsky
Journal:  J Am Chem Soc       Date:  2013-08-22       Impact factor: 15.419

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