Literature DB >> 20589758

Sumoylation modulates a domain in CTCF that activates transcription and decondenses chromatin.

Neal S Kitchen1, Christopher J Schoenherr.   

Abstract

CTCF is a multipurpose transcription factor with activation, repression, and insulator activity. It also participates in regulating chromatin architecture by maintaining open chromatin and mediating long-range chromosomal interactions. Participation by CTCF in such diverse processes suggests that it has multiple functional domains that regulate transcription and modify chromatin structure. Using transient and integrated reporters, we identified a 107-amino-acid domain in CTCF's N-terminal region that is capable of transcriptional activation and chromatin decondensation. This domain demonstrated moderate transactivation when targeted to a promoter proximal position but showed little activity from more distal positions and on a natural promoter. By contrast, the activation domain dramatically decondensed the compact chromatin structure of a large transgene array, in a manner similar to the potent activation domain in VP16. In addition, the activation domain is subject to conjugation by SUMO, which reduced its transcriptional and chromatin opening activity. Moreover, mimicking full sumoylation by fusing Sumo-1 or -3 to the activation domain eliminated its transcriptional activity, but only Sumo-3 fusion prevented chromatin opening. We suggest that the activation domain's limited transactivation, but strong chromatin decondensation allows CTCF to establish and maintain open chromatin without necessarily activating transcription. Sumoylation may contribute to CTCF's enhancer blocking or repression functions by reducing transactivation and chromatin opening.
© 2010 Wiley-Liss, Inc.

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Year:  2010        PMID: 20589758     DOI: 10.1002/jcb.22751

Source DB:  PubMed          Journal:  J Cell Biochem        ISSN: 0730-2312            Impact factor:   4.429


  14 in total

1.  Identification of SUMO-2/3-modified proteins associated with mitotic chromosomes.

Authors:  Caelin Cubeñas-Potts; Tharan Srikumar; Christine Lee; Omoruyi Osula; Divya Subramonian; Xiang-Dong Zhang; Robert J Cotter; Brian Raught; Michael J Matunis
Journal:  Proteomics       Date:  2015-01-07       Impact factor: 3.984

2.  De-SUMOylation of CCCTC binding factor (CTCF) in hypoxic stress-induced human corneal epithelial cells.

Authors:  Jie Wang; Yumei Wang; Luo Lu
Journal:  J Biol Chem       Date:  2012-02-21       Impact factor: 5.157

Review 3.  Genome-wide studies of CCCTC-binding factor (CTCF) and cohesin provide insight into chromatin structure and regulation.

Authors:  Bum-Kyu Lee; Vishwanath R Iyer
Journal:  J Biol Chem       Date:  2012-09-05       Impact factor: 5.157

Review 4.  Making connections: insulators organize eukaryotic chromosomes into independent cis-regulatory networks.

Authors:  Darya Chetverina; Tsutomu Aoki; Maksim Erokhin; Pavel Georgiev; Paul Schedl
Journal:  Bioessays       Date:  2013-11-26       Impact factor: 4.345

Review 5.  Regulation of 3D chromatin organization by CTCF.

Authors:  Jian-Feng Xiang; Victor G Corces
Journal:  Curr Opin Genet Dev       Date:  2020-11-28       Impact factor: 5.578

6.  The apoptosis associated tyrosine kinase gene is frequently hypermethylated in human cancer and is regulated by epigenetic mechanisms.

Authors:  Tanja Haag; Christina E Herkt; Sara K Walesch; Antje M Richter; Reinhard H Dammann
Journal:  Genes Cancer       Date:  2014-09

7.  CTCF induces histone variant incorporation, erases the H3K27me3 histone mark and opens chromatin.

Authors:  Oliver Weth; Christine Paprotka; Katharina Günther; Astrid Schulte; Manuel Baierl; Joerg Leers; Niels Galjart; Rainer Renkawitz
Journal:  Nucleic Acids Res       Date:  2014-10-07       Impact factor: 16.971

8.  Oct4/Sox2 binding sites contribute to maintaining hypomethylation of the maternal igf2/h19 imprinting control region.

Authors:  David L Zimmerman; Craig S Boddy; Christopher S Schoenherr
Journal:  PLoS One       Date:  2013-12-06       Impact factor: 3.240

9.  Sumoylation at chromatin governs coordinated repression of a transcriptional program essential for cell growth and proliferation.

Authors:  Hélène Neyret-Kahn; Moussa Benhamed; Tao Ye; Stéphanie Le Gras; Jack-Christophe Cossec; Pierre Lapaquette; Oliver Bischof; Maia Ouspenskaia; Mary Dasso; Jacob Seeler; Irwin Davidson; Anne Dejean
Journal:  Genome Res       Date:  2013-07-26       Impact factor: 9.043

10.  Ectopically tethered CP190 induces large-scale chromatin decondensation.

Authors:  Sajad H Ahanger; Katharina Günther; Oliver Weth; Marek Bartkuhn; Ramesh R Bhonde; Yogesh S Shouche; Rainer Renkawitz
Journal:  Sci Rep       Date:  2014-01-29       Impact factor: 4.379

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