Literature DB >> 20585100

Genome-wide association studies of cancer.

Zsofia K Stadler1, Peter Thom, Mark E Robson, Jeffrey N Weitzel, Noah D Kauff, Karen E Hurley, Vincent Devlin, Bert Gold, Robert J Klein, Kenneth Offit.   

Abstract

Knowledge of the inherited risk for cancer is an important component of preventive oncology. In addition to well-established syndromes of cancer predisposition, much remains to be discovered about the genetic variation underlying susceptibility to common malignancies. Increased knowledge about the human genome and advances in genotyping technology have made possible genome-wide association studies (GWAS) of human diseases. These studies have identified many important regions of genetic variation associated with an increased risk for human traits and diseases including cancer. Understanding the principles, major findings, and limitations of GWAS is becoming increasingly important for oncologists as dissemination of genomic risk tests directly to consumers is already occurring through commercial companies. GWAS have contributed to our understanding of the genetic basis of cancer and will shed light on biologic pathways and possible new strategies for targeted prevention. To date, however, the clinical utility of GWAS-derived risk markers remains limited.

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Year:  2010        PMID: 20585100      PMCID: PMC2953976          DOI: 10.1200/JCO.2009.25.7816

Source DB:  PubMed          Journal:  J Clin Oncol        ISSN: 0732-183X            Impact factor:   44.544


  140 in total

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Authors:  Peter M Siegel; Joan Massagué
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2.  CHEK2*1100delC and susceptibility to breast cancer: a collaborative analysis involving 10,860 breast cancer cases and 9,065 controls from 10 studies.

Authors: 
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Review 3.  Mapping complex disease loci in whole-genome association studies.

Authors:  Christopher S Carlson; Michael A Eberle; Leonid Kruglyak; Deborah A Nickerson
Journal:  Nature       Date:  2004-05-27       Impact factor: 49.962

4.  The effects of human population structure on large genetic association studies.

Authors:  Jonathan Marchini; Lon R Cardon; Michael S Phillips; Peter Donnelly
Journal:  Nat Genet       Date:  2004-03-28       Impact factor: 38.330

5.  Assessing the impact of population stratification on genetic association studies.

Authors:  Matthew L Freedman; David Reich; Kathryn L Penney; Gavin J McDonald; Andre A Mignault; Nick Patterson; Stacey B Gabriel; Eric J Topol; Jordan W Smoller; Carlos N Pato; Michele T Pato; Tracey L Petryshen; Laurence N Kolonel; Eric S Lander; Pamela Sklar; Brian Henderson; Joel N Hirschhorn; David Altshuler
Journal:  Nat Genet       Date:  2004-03-28       Impact factor: 38.330

6.  Effects of individualized breast cancer risk counseling: a randomized trial.

Authors:  C Lerman; E Lustbader; B Rimer; M Daly; S Miller; C Sands; A Balshem
Journal:  J Natl Cancer Inst       Date:  1995-02-15       Impact factor: 13.506

7.  Systematic population-based assessment of cancer risk in first-degree relatives of cancer probands.

Authors:  D E Goldgar; D F Easton; L A Cannon-Albright; M H Skolnick
Journal:  J Natl Cancer Inst       Date:  1994-11-02       Impact factor: 13.506

8.  Risk of colorectal cancer in the families of patients with adenomatous polyps. National Polyp Study Workgroup.

Authors:  S J Winawer; A G Zauber; H Gerdes; M J O'Brien; L S Gottlieb; S S Sternberg; J H Bond; J D Waye; M Schapiro; J F Panish
Journal:  N Engl J Med       Date:  1996-01-11       Impact factor: 91.245

9.  Genetic counselling for cancer and risk perception.

Authors:  Annika Lidén; Gunilla Berglund; Mats G Hansson; Richard Rosenquist; P O Sjödén; Karin Nordin
Journal:  Acta Oncol       Date:  2003       Impact factor: 4.089

Review 10.  Fibroblast growth factors.

Authors:  D M Ornitz; N Itoh
Journal:  Genome Biol       Date:  2001-03-09       Impact factor: 13.583

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  73 in total

1.  Systematic evaluation of apoptotic pathway gene polymorphisms and lung cancer risk.

Authors:  Jie Lin; Charles Lu; David J Stewart; Jian Gu; Maosheng Huang; David W Chang; Scott M Lippman; Xifeng Wu
Journal:  Carcinogenesis       Date:  2012-06-04       Impact factor: 4.944

Review 2.  The use of genomic information to optimize cancer chemotherapy.

Authors:  Federico Innocenti; Nancy J Cox; M Eileen Dolan
Journal:  Semin Oncol       Date:  2011-04       Impact factor: 4.929

3.  The future workforce in cancer prevention: advancing discovery, research, and technology.

Authors:  Wayne D Newhauser; Michael E Scheurer; Jessica M Faupel-Badger; Jessica Clague; Jeffrey Weitzel; Kendra V Woods
Journal:  J Cancer Educ       Date:  2012-05       Impact factor: 2.037

Review 4.  Implications of genome-wide association studies in cancer therapeutics.

Authors:  Jai N Patel; Howard L McLeod; Federico Innocenti
Journal:  Br J Clin Pharmacol       Date:  2013-09       Impact factor: 4.335

Review 5.  Genomics of adult and pediatric solid tumors.

Authors:  Zahraa Rahal; Farah Abdulhai; Humam Kadara; Raya Saab
Journal:  Am J Cancer Res       Date:  2018-08-01       Impact factor: 6.166

6.  Prostate cancer risk alleles and their associations with other malignancies.

Authors:  Phillip R Cooper; Barry B McGuire; Brian T Helfand; Stacy Loeb; Qiaoyan Hu; William J Catalona
Journal:  Urology       Date:  2011-08-05       Impact factor: 2.649

7.  Genetic variants at 4q21, 4q23 and 12q24 are associated with esophageal squamous cell carcinoma risk in a Chinese population.

Authors:  Yong Gao; Yisha He; Jing Xu; Lin Xu; Jiangbo Du; Chen Zhu; Haiyong Gu; Hongxia Ma; Zhibin Hu; Guangfu Jin; Xiaofei Chen; Hongbing Shen
Journal:  Hum Genet       Date:  2013-02-22       Impact factor: 4.132

8.  Identification of shared and unique susceptibility pathways among cancers of the lung, breast, and prostate from genome-wide association studies and tissue-specific protein interactions.

Authors:  David C Qian; Jinyoung Byun; Younghun Han; Casey S Greene; John K Field; Rayjean J Hung; Yonathan Brhane; John R Mclaughlin; Gordon Fehringer; Maria Teresa Landi; Albert Rosenberger; Heike Bickeböller; Jyoti Malhotra; Angela Risch; Joachim Heinrich; David J Hunter; Brian E Henderson; Christopher A Haiman; Fredrick R Schumacher; Rosalind A Eeles; Douglas F Easton; Daniela Seminara; Christopher I Amos
Journal:  Hum Mol Genet       Date:  2015-10-19       Impact factor: 6.150

9.  A stratified genetic risk assessment for testicular cancer.

Authors:  C P Kratz; M H Greene; G Bratslavsky; J Shi
Journal:  Int J Androl       Date:  2011-05-12

10.  Common genetic variants and modification of penetrance of BRCA2-associated breast cancer.

Authors:  Mia M Gaudet; Tomas Kirchhoff; Todd Green; Joseph Vijai; Joshua M Korn; Candace Guiducci; Ayellet V Segrè; Kate McGee; Lesley McGuffog; Christiana Kartsonaki; Jonathan Morrison; Sue Healey; Olga M Sinilnikova; Dominique Stoppa-Lyonnet; Sylvie Mazoyer; Marion Gauthier-Villars; Hagay Sobol; Michel Longy; Marc Frenay; Frans B L Hogervorst; Matti A Rookus; J Margriet Collée; Nicoline Hoogerbrugge; Kees E P van Roozendaal; Marion Piedmonte; Wendy Rubinstein; Stacy Nerenstone; Linda Van Le; Stephanie V Blank; Trinidad Caldés; Miguel de la Hoya; Heli Nevanlinna; Kristiina Aittomäki; Conxi Lazaro; Ignacio Blanco; Adalgeir Arason; Oskar T Johannsson; Rosa B Barkardottir; Peter Devilee; Olofunmilayo I Olopade; Susan L Neuhausen; Xianshu Wang; Zachary S Fredericksen; Paolo Peterlongo; Siranoush Manoukian; Monica Barile; Alessandra Viel; Paolo Radice; Catherine M Phelan; Steven Narod; Gad Rennert; Flavio Lejbkowicz; Anath Flugelman; Irene L Andrulis; Gord Glendon; Hilmi Ozcelik; Amanda E Toland; Marco Montagna; Emma D'Andrea; Eitan Friedman; Yael Laitman; Ake Borg; Mary Beattie; Susan J Ramus; Susan M Domchek; Katherine L Nathanson; Tim Rebbeck; Amanda B Spurdle; Xiaoqing Chen; Helene Holland; Esther M John; John L Hopper; Saundra S Buys; Mary B Daly; Melissa C Southey; Mary Beth Terry; Nadine Tung; Thomas V Overeem Hansen; Finn C Nielsen; Mark H Greene; Mark I Greene; Phuong L Mai; Ana Osorio; Mercedes Durán; Raquel Andres; Javier Benítez; Jeffrey N Weitzel; Judy Garber; Ute Hamann; Susan Peock; Margaret Cook; Clare Oliver; Debra Frost; Radka Platte; D Gareth Evans; Fiona Lalloo; Ros Eeles; Louise Izatt; Lisa Walker; Jacqueline Eason; Julian Barwell; Andrew K Godwin; Rita K Schmutzler; Barbara Wappenschmidt; Stefanie Engert; Norbert Arnold; Dorothea Gadzicki; Michael Dean; Bert Gold; Robert J Klein; Fergus J Couch; Georgia Chenevix-Trench; Douglas F Easton; Mark J Daly; Antonis C Antoniou; David M Altshuler; Kenneth Offit
Journal:  PLoS Genet       Date:  2010-10-28       Impact factor: 5.917

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