Literature DB >> 20582471

A guide to successful bioprospecting: informed by actinobacterial systematics.

Michael Goodfellow1, Hans-Peter Fiedler.   

Abstract

New structurally diverse natural products are discovered when novel screening procedures are introduced or when high quality biological materials from new sources are examined in existing screens, hence it is important to foster these two aspects of novelty in drug discovery programmes. Amongst prokaryotes, actinomycetes, notably streptomycetes, remain a rich source of new natural products though it has become increasingly difficult to find such metabolites from common actinomycetes as screening 'old friends' leads to the costly rediscovery of known compounds. The bioprospecting strategy which is the subject of this review is based upon the premise that new secondary metabolites can be found by screening relatively small numbers of dereplicated, novel actinomycetes isolated from marine sediments. The success of the strategy is exemplified by the discovery of a range of novel bioactive compounds, notably atrop-abyssomicin C and proximicins A, B and C from Verrucosispora strains isolated from sediment samples taken from the Sea of Japan and the Raune Fjord, respectively, and the dermacozines derived from Dermacoccus strains isolated from the Challenger Deep of the Mariana Trench in the Pacific Ocean. The importance of current advances in prokaryotic systematics in work of this nature is stressed and a plea made that resources be sought to train, support and employ the next generation of actinobacterial systematists.

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Year:  2010        PMID: 20582471     DOI: 10.1007/s10482-010-9460-2

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  67 in total

Review 1.  Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.

Authors:  Beile Gao; Radhey S Gupta
Journal:  Microbiol Mol Biol Rev       Date:  2012-03       Impact factor: 11.056

2.  Discovery and engineered overproduction of antimicrobial nucleoside antibiotic A201A from the deep-sea marine actinomycete Marinactinospora thermotolerans SCSIO 00652.

Authors:  Qinghua Zhu; Jun Li; Junying Ma; Minghe Luo; Bo Wang; Hongbo Huang; Xinpeng Tian; Wenjun Li; Si Zhang; Changsheng Zhang; Jianhua Ju
Journal:  Antimicrob Agents Chemother       Date:  2011-11-07       Impact factor: 5.191

3.  Streptomyces bohaiensis sp. nov., a novel actinomycete isolated from Scomberomorus niphonius in the Bohai Sea.

Authors:  Hua-Qi Pan; Juan Cheng; Dao-Feng Zhang; Su-Ya Yu; Thi-Nhan Khieu; Chu Ky Son; Zhao Jiang; Jiang-Chun Hu; Wen-Jun Li
Journal:  J Antibiot (Tokyo)       Date:  2014-10-01       Impact factor: 2.649

4.  Microbial Diversity and Chemical Multiplicity of Culturable, Taxonomically Similar Bacterial Symbionts of the Leaf-Cutting Ant Acromyrmex coronatus.

Authors:  Ana Flávia Canovas Martinez; Luís Gustavo de Almeida; Luiz Alberto Beraldo Moraes; Fernando Luís Cônsoli
Journal:  Microb Ecol       Date:  2019-02-21       Impact factor: 4.552

5.  Streptomyces songpinggouensis sp. nov., a Novel Actinomycete Isolated from Soil in Sichuan, China.

Authors:  Xuejiao Guan; Wenchao Li; Chongxi Liu; Pinjiao Jin; Siyu Guo; Xiangjing Wang; Wensheng Xiang
Journal:  Curr Microbiol       Date:  2016-09-01       Impact factor: 2.188

6.  Potential anti-leptospiral compound, leptomycin B from marine Streptomyces indiaensis MSU5: taxonomy, fermentation, compound isolation, in vitro and in vivo efficacy.

Authors:  Jeyaraman Thirumalairaj; Karikalacholan Sivasankari; Kalimuthusamy Natarajaseenivasan; Ramasamy Balagurunathan
Journal:  World J Microbiol Biotechnol       Date:  2017-09-27       Impact factor: 3.312

7.  Bioguided isolation, characterization and media optimization for production of Lysolipins by actinomycete as antimicrobial compound against Xanthomonas citri subsp. citri.

Authors:  Júlia Pereira Rodrigues; Ana Paula Ferranti Peti; Fernanda Salés Figueiró; Izadora de Souza Rocha; Vinicius Ricardo Acquaro Junior; Tamires Garcia Silva; Itamar Soares de Melo; Franklin Behlau; Luiz Alberto Beraldo Moraes
Journal:  Mol Biol Rep       Date:  2018-10-11       Impact factor: 2.316

8.  Impact of malic enzymes on antibiotic and triacylglycerol production in Streptomyces coelicolor.

Authors:  Eduardo Rodriguez; Laura Navone; Paula Casati; Hugo Gramajo
Journal:  Appl Environ Microbiol       Date:  2012-04-27       Impact factor: 4.792

9.  Streptomyces bambusae sp. nov., Showing Antifungal and Antibacterial Activities, Isolated from Bamboo (Bambuseae) Rhizosphere Soil Using a Modified Culture Method.

Authors:  Tuan Manh Nguyen; Jaisoo Kim
Journal:  Curr Microbiol       Date:  2015-09-02       Impact factor: 2.188

Review 10.  Matching the power of high throughput screening to the chemical diversity of natural products.

Authors:  Curtis J Henrich; John A Beutler
Journal:  Nat Prod Rep       Date:  2013-08-08       Impact factor: 13.423

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