Literature DB >> 20569215

Dual primer emulsion PCR for next- generation DNA sequencing.

Ming Yan Xu1, Anthony D Aragon, Monica R Mascarenas, Norah Torrez-Martinez, Jeremy S Edwards.   

Abstract

We have developed a highly sensitive single-molecule clonal amplification method called dual primer emulsion PCR (DPePCR) for next-generation DNA sequencing. The approach is similar in concept to standard emulsion PCR; however, in DPePCR both primers are attached to the beads, therefore following PCR amplification, both strands of the PCR products are attached to the beads. The ends of each strand can be freed for analysis by restriction digestion of the bridged PCR fragments, which allows efficient paired-end sequencing of fragment libraries.

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Year:  2010        PMID: 20569215      PMCID: PMC4049327          DOI: 10.2144/000113423

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  10 in total

1.  Transforming single DNA molecules into fluorescent magnetic particles for detection and enumeration of genetic variations.

Authors:  Devin Dressman; Hai Yan; Giovanni Traverso; Kenneth W Kinzler; Bert Vogelstein
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-11       Impact factor: 11.205

2.  Accurate multiplex polony sequencing of an evolved bacterial genome.

Authors:  Jay Shendure; Gregory J Porreca; Nikos B Reppas; Xiaoxia Lin; John P McCutcheon; Abraham M Rosenbaum; Michael D Wang; Kun Zhang; Robi D Mitra; George M Church
Journal:  Science       Date:  2005-08-04       Impact factor: 47.728

Review 3.  Polony DNA sequencing.

Authors:  Gregory J Porreca; Jay Shendure; George M Church
Journal:  Curr Protoc Mol Biol       Date:  2006-11

Review 4.  Next-generation DNA sequencing techniques.

Authors:  Wilhelm J Ansorge
Journal:  N Biotechnol       Date:  2009-02-03       Impact factor: 5.079

Review 5.  Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses.

Authors:  Melissa J Fullwood; Chia-Lin Wei; Edison T Liu; Yijun Ruan
Journal:  Genome Res       Date:  2009-04       Impact factor: 9.043

6.  Next-generation DNA sequencing.

Authors:  Jay Shendure; Hanlee Ji
Journal:  Nat Biotechnol       Date:  2008-10       Impact factor: 54.908

Review 7.  Next-generation DNA sequencing methods.

Authors:  Elaine R Mardis
Journal:  Annu Rev Genomics Hum Genet       Date:  2008       Impact factor: 8.929

Review 8.  Sequencing technologies - the next generation.

Authors:  Michael L Metzker
Journal:  Nat Rev Genet       Date:  2009-12-08       Impact factor: 53.242

9.  Man-made cell-like compartments for molecular evolution.

Authors:  D S Tawfik; A D Griffiths
Journal:  Nat Biotechnol       Date:  1998-07       Impact factor: 54.908

10.  DNA analysis with multiplex microarray-enhanced PCR.

Authors:  A Pemov; H Modi; D P Chandler; S Bavykin
Journal:  Nucleic Acids Res       Date:  2005-01-20       Impact factor: 16.971

  10 in total
  1 in total

Review 1.  Next-generation sequencing in the clinic: promises and challenges.

Authors:  Jiekun Xuan; Ying Yu; Tao Qing; Lei Guo; Leming Shi
Journal:  Cancer Lett       Date:  2012-11-19       Impact factor: 8.679

  1 in total

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