Literature DB >> 20563244

Five Hundred Microsatellite Loci for Peromyscus.

Jesse N Weber1, Maureen B Peters, Olga V Tsyusko, Catherine R Linnen, Cris Hagen, Nancy A Schable, Tracey D Tuberville, Anna M McKee, Stacey L Lance, Kenneth L Jones, Heidi S Fisher, Michael J Dewey, Hopi E Hoekstra, Travis C Glenn.   

Abstract

Mice of the genus Peromyscus, including several endangered subspecies, occur throughout North America and have been important models for conservation research. We describe 526 primer pairs that amplify microsatellite DNA loci for P. maniculatus bairdii, 467 of which also amplify in P. polionotus subgriseus. For 12 of these loci, we report diversity data from a natural population. These markers will be an important resource for future genomic studies of Peromyscus evolution and mammalian conservation.

Entities:  

Year:  2010        PMID： 20563244      PMCID： PMC2885811          DOI： 10.1007/s10592-009-9941-x

Source DB:  PubMed          Journal:  Conserv Genet        ISSN： 1566-0621            Impact factor:   2.538


  19 in total

Review 1.  Deer mice: "The Drosophila of North American mammalogy".

Authors:  M J Dewey; W D Dawson
Journal:  Genesis       Date:  2001-03       Impact factor: 2.487

2.  'Touchdown' PCR to circumvent spurious priming during gene amplification.

Authors:  R H Don; P T Cox; B J Wainwright; K Baker; J S Mattick
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

3.  A single amino acid mutation contributes to adaptive beach mouse color pattern.

Authors:  Hopi E Hoekstra; Rachel J Hirschmann; Richard A Bundey; Paul A Insel; Janet P Crossland
Journal:  Science       Date:  2006-07-07       Impact factor: 47.728

Review 4.  Bovine genome mapping: evolutionary inference and the power of comparative genomics.

Authors:  J E Womack; S R Kata
Journal:  Curr Opin Genet Dev       Date:  1995-12       Impact factor: 5.578

5.  Microsatellite variation and recombination rate in the human genome.

Authors:  B A Payseur; M W Nachman
Journal:  Genetics       Date:  2000-11       Impact factor: 4.562

6.  Serologic and genetic identification of Peromyscus maniculatus as the primary rodent reservoir for a new hantavirus in the southwestern United States.

Authors:  J E Childs; T G Ksiazek; C F Spiropoulou; J W Krebs; S Morzunov; G O Maupin; K L Gage; P E Rollin; J Sarisky; R E Enscore
Journal:  J Infect Dis       Date:  1994-06       Impact factor: 5.226

7.  Adaptive basis of geographic variation: genetic, phenotypic and environmental differences among beach mouse populations.

Authors:  Lynne M Mullen; Sacha N Vignieri; Jeffery A Gore; Hopi E Hoekstra
Journal:  Proc Biol Sci       Date:  2009-08-05       Impact factor: 5.349

8.  GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.

Authors:  Rod Peakall; Peter E Smouse
Journal:  Bioinformatics       Date:  2012-07-20       Impact factor: 6.937

9.  Adaptive variation in beach mice produced by two interacting pigmentation genes.

Authors:  Cynthia C Steiner; Jesse N Weber; Hopi E Hoekstra
Journal:  PLoS Biol       Date:  2007-09       Impact factor: 8.029

10.  Natural selection along an environmental gradient: a classic cline in mouse pigmentation.

Authors:  Lynne M Mullen; Hopi E Hoekstra
Journal:  Evolution       Date:  2008-07       Impact factor: 3.694
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  5 in total

1.  A genetic map of Peromyscus with chromosomal assignment of linkage groups (a Peromyscus genetic map).

Authors:  Jane Kenney-Hunt; Adrienne Lewandowski; Travis C Glenn; Julie L Glenn; Olga V Tsyusko; Rachel J O'Neill; Judy Brown; Clifton M Ramsdell; Quang Nguyen; Tony Phan; Kimberly R Shorter; Michael J Dewey; Gabor Szalai; Paul B Vrana; Michael R Felder
Journal:  Mamm Genome       Date:  2014-01-21       Impact factor: 2.957

2.  The biology and methodology of assisted reproduction in deer mice (Peromyscus maniculatus).

Authors:  Monika Veres; Amanda R Duselis; Audrey Graft; William Pryor; Janet Crossland; Paul B Vrana; Gabor Szalai
Journal:  Theriogenology       Date:  2011-09-14       Impact factor: 2.740

3.  Evidence of population genetic effects in Peromyscus melanophrys chronically exposed to mine tailings in Morelos, Mexico.

Authors:  Patricia Mussali-Galante; Efraín Tovar-Sánchez; Mahara Valverde; Leticia Valencia-Cuevas; E Rojas
Journal:  Environ Sci Pollut Res Int       Date:  2012-10-30       Impact factor: 4.223

4.  Two different high throughput sequencing approaches identify thousands of de novo genomic markers for the genetically depleted Bornean elephant.

Authors:  Reeta Sharma; Benoit Goossens; Célia Kun-Rodrigues; Tatiana Teixeira; Nurzhafarina Othman; Jason Q Boone; Nathaniel K Jue; Craig Obergfell; Rachel J O'Neill; Lounès Chikhi
Journal:  PLoS One       Date:  2012-11-21       Impact factor: 3.240

5.  Significant variance in genetic diversity among populations of Schistosoma haematobium detected using microsatellite DNA loci from a genome-wide database.

Authors:  Travis C Glenn; Stacey L Lance; Anna M McKee; Bonnie L Webster; Aidan M Emery; Adhemar Zerlotini; Guilherme Oliveira; David Rollinson; Brant C Faircloth
Journal:  Parasit Vectors       Date:  2013-10-17       Impact factor: 3.876
  5 in total

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