Literature DB >> 20561532

Correlation between the OmpG secondary structure and its pH-dependent alterations monitored by FTIR.

Filiz Korkmaz-Ozkan1, Stefan Köster, Werner Kühlbrandt, Werner Mäntele, Ozkan Yildiz.   

Abstract

The channel activity of the outer-membrane protein G (OmpG) from Escherichia coli is pH-dependent. To investigate the role of the histidine pair His231/His261 in triggering channel opening and closing, we mutated both histidines to alanines and cysteines. Fourier transform infrared spectra revealed that the OmpG mutants stay-independent of pH-in an open conformation. Temperature ramp experiments indicate that the mutants are as stable as the open state of wild-type OmpG. The X-ray structure of the alanine-substituted OmpG mutant obtained at pH 6.5 confirms the constitutively open conformation. Compared to previous structures of the wild-type protein in the open and closed conformation, the mutant structure shows a difference in the extracellular loop L6 connecting beta-strands S12 and S13. A deletion of amino acids 220-228, which are thought to block the channel at low pH in wild-type OmpG, indicates conformational changes, which might be triggered by His231/His261. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20561532     DOI: 10.1016/j.jmb.2010.06.015

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  6 in total

1.  NMR-based conformational ensembles explain pH-gated opening and closing of OmpG channel.

Authors:  Tiandi Zhuang; Christina Chisholm; Min Chen; Lukas K Tamm
Journal:  J Am Chem Soc       Date:  2013-10-01       Impact factor: 15.419

2.  Mutation of the critical pH-gating residues histidine 231 to glutamate increase open probability of outer membrane protein G in planar lipid bilayer.

Authors:  Mu Yu; Peibei Sun; Yao He; Liang Xiao; Demeng Sun; Longhua Zhang; Changlin Tian
Journal:  Protein Cell       Date:  2013-11       Impact factor: 14.870

3.  A Nanopore Approach for Analysis of Caspase-7 Activity in Cell Lysates.

Authors:  Bach Pham; Scott J Eron; Maureen E Hill; Xin Li; Monifa A Fahie; Jeanne A Hardy; Min Chen
Journal:  Biophys J       Date:  2019-08-02       Impact factor: 4.033

4.  Comparison of NMR and crystal structures of membrane proteins and computational refinement to improve model quality.

Authors:  Julia Koehler Leman; Andrew R D'Avino; Yash Bhatnagar; Jeffrey J Gray
Journal:  Proteins       Date:  2017-11-08

5.  Mechanism of OmpG pH-Dependent Gating from Loop Ensemble and Single Channel Studies.

Authors:  Alan Perez-Rathke; Monifa A Fahie; Christina Chisholm; Jie Liang; Min Chen
Journal:  J Am Chem Soc       Date:  2018-01-11       Impact factor: 15.419

6.  Structure of outer membrane protein G in lipid bilayers.

Authors:  Joren S Retel; Andrew J Nieuwkoop; Matthias Hiller; Victoria A Higman; Emeline Barbet-Massin; Jan Stanek; Loren B Andreas; W Trent Franks; Barth-Jan van Rossum; Kutti R Vinothkumar; Lieselotte Handel; Gregorio Giuseppe de Palma; Benjamin Bardiaux; Guido Pintacuda; Lyndon Emsley; Werner Kühlbrandt; Hartmut Oschkinat
Journal:  Nat Commun       Date:  2017-12-12       Impact factor: 14.919

  6 in total

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