Literature DB >> 20538873

An invitation to reproducible computational research.

David L Donoho1.   

Abstract

Mesh:

Year:  2010        PMID: 20538873     DOI: 10.1093/biostatistics/kxq028

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


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  35 in total

1.  Understanding spoken language through TalkBank.

Authors:  Brian MacWhinney
Journal:  Behav Res Methods       Date:  2019-08

2.  The case for open computer programs.

Authors:  Darrel C Ince; Leslie Hatton; John Graham-Cumming
Journal:  Nature       Date:  2012-02-22       Impact factor: 49.962

3.  Principles for the ethical analysis of clinical and translational research.

Authors:  Jonathan A L Gelfond; Elizabeth Heitman; Brad H Pollock; Craig M Klugman
Journal:  Stat Med       Date:  2011-07-12       Impact factor: 2.373

4.  NMRbox: A Resource for Biomolecular NMR Computation.

Authors:  Mark W Maciejewski; Adam D Schuyler; Michael R Gryk; Ion I Moraru; Pedro R Romero; Eldon L Ulrich; Hamid R Eghbalnia; Miron Livny; Frank Delaglio; Jeffrey C Hoch
Journal:  Biophys J       Date:  2017-04-25       Impact factor: 4.033

5.  Toward standard practices for sharing computer code and programs in neuroscience.

Authors:  Stephen J Eglen; Ben Marwick; Yaroslav O Halchenko; Michael Hanke; Shoaib Sufi; Padraig Gleeson; R Angus Silver; Andrew P Davison; Linda Lanyon; Mathew Abrams; Thomas Wachtler; David J Willshaw; Christophe Pouzat; Jean-Baptiste Poline
Journal:  Nat Neurosci       Date:  2017-05-25       Impact factor: 24.884

6.  Using ecological production functions to link ecological processes to ecosystem services.

Authors:  Randall Jf Bruins; Timothy J Canfield; Clifford Duke; Larry Kapustka; Amanda M Nahlik; Ralf B Schäfer
Journal:  Integr Environ Assess Manag       Date:  2016-09-28       Impact factor: 2.992

Review 7.  Interictal high-frequency oscillations in focal human epilepsy.

Authors:  Jan Cimbalnik; Michal T Kucewicz; Greg Worrell
Journal:  Curr Opin Neurol       Date:  2016-04       Impact factor: 5.710

8.  Free digital image analysis software helps to resolve equivocal scores in HER2 immunohistochemistry.

Authors:  Henrik O Helin; Vilppu J Tuominen; Onni Ylinen; Heikki J Helin; Jorma Isola
Journal:  Virchows Arch       Date:  2015-10-22       Impact factor: 4.064

Review 9.  Best Practices for Making Reproducible Biochemical Models.

Authors:  Veronica L Porubsky; Arthur P Goldberg; Anand K Rampadarath; David P Nickerson; Jonathan R Karr; Herbert M Sauro
Journal:  Cell Syst       Date:  2020-08-26       Impact factor: 10.304

10.  Ten simple rules for writing Dockerfiles for reproducible data science.

Authors:  Daniel Nüst; Vanessa Sochat; Ben Marwick; Stephen J Eglen; Tim Head; Tony Hirst; Benjamin D Evans
Journal:  PLoS Comput Biol       Date:  2020-11-10       Impact factor: 4.475

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