Literature DB >> 20526614

Genetic structure of the genus Lemna L. (Lemnaceae) as revealed by amplified fragment length polymorphism.

Manuela Bog1, Henryk Baumbach, Ulrike Schween, Frank Hellwig, Elias Landolt, Klaus-J Appenroth.   

Abstract

Duckweeds (Lemnaceae) are extremely reduced in morphology, which made their taxonomy a challenge for a long time. The amplified fragment length polymorphism (AFLP) marker technique was applied to solve this problem. 84 clones of the genus Lemna were investigated representing all 13 accepted Lemna species. By neighbour-joining (NJ) analysis, 10 out of these 13 species were clearly recognized: L. minor, L. obscura, L. turionifera, L. japonica, L. disperma, L. aequinoctialis, L. perpusilla, L. trisulca, L. tenera, and L. minuta. However, L. valdiviana and L. yungensis could be distinguished neither by NJ cluster analysis nor by structure analysis. Moreover, the 16 analysed clones of L. gibba were assembled into four genetically differentiated groups. Only one of these groups, which includes the standard clones 7107 (G1) and 7741 (G3), represents obviously the "true" L. gibba. At least four of the clones investigated, so far considered as L. gibba (clones 8655a, 9481, 9436b, and Tra05-L), represent evidently close relatives to L. turionifera but do not form turions under any of the conditions tested. Another group of clones (6745, 6751, and 7922) corresponds to putative hybrids and may be identical with L. parodiana, a species not accepted until now because of the difficulties of delineation on morphology alone. In conclusion, AFLP analysis offers a solid base for the identification of Lemna clones, which is particularly important in view of Lemnaceae application in biomonitoring.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20526614     DOI: 10.1007/s00425-010-1201-2

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  21 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  Using AFLP to resolve phylogenetic relationships in a morphologically diversified plant species complex when nuclear and chloroplast sequences fail to reveal variability.

Authors:  Laurence Després; Ludovic Gielly; Bénédicte Redoutet; Pierre Taberlet
Journal:  Mol Phylogenet Evol       Date:  2003-05       Impact factor: 4.286

Review 3.  Statistical analysis of amplified fragment length polymorphism data: a toolbox for molecular ecologists and evolutionists.

Authors:  A Bonin; D Ehrich; S Manel
Journal:  Mol Ecol       Date:  2007-09       Impact factor: 6.185

4.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

5.  Phylogenetic relationships of aroids and duckweeds (Araceae) inferred from coding and noncoding plastid DNA.

Authors:  Lidia I Cabrera; Gerardo A Salazar; Mark W Chase; Simon J Mayo; Josef Bogner; Patricia Dávila
Journal:  Am J Bot       Date:  2008-09       Impact factor: 3.844

6.  Mathematical model for studying genetic variation in terms of restriction endonucleases.

Authors:  M Nei; W H Li
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

7.  TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment.

Authors:  Y Van de Peer; R De Wachter
Journal:  Comput Appl Biosci       Date:  1994-09

8.  No photoperiodoc control of the formation of turions in eight clones of Spirodela polyrhiza.

Authors:  Klaus Appenroth
Journal:  J Plant Physiol       Date:  2003-11       Impact factor: 3.549

9.  High expression of transgene protein in Spirodela.

Authors:  Ron Vunsh; Jihong Li; Uri Hanania; Marvin Edelman; Moshe Flaishman; Avihai Perl; Jean-Pierre Wisniewski; Georges Freyssinet
Journal:  Plant Cell Rep       Date:  2007-05-10       Impact factor: 4.570

10.  Callus induction and regeneration in Spirodela and Lemna.

Authors:  J Li; M Jain; R Vunsh; J Vishnevetsky; U Hanania; M Flaishman; A Perl; M Edelman
Journal:  Plant Cell Rep       Date:  2003-11-05       Impact factor: 4.570

View more
  15 in total

1.  Duckweed rising at Chengdu: summary of the 1st International Conference on Duckweed Application and Research.

Authors:  Hai Zhao; Klaus Appenroth; Louis Landesman; Armando A Salmeán; Eric Lam
Journal:  Plant Mol Biol       Date:  2012-02-09       Impact factor: 4.076

2.  Genetic structure of duckweed population of Spirodela, Landoltia and Lemna from Lake Tai, China.

Authors:  Jie Tang; Fei Zhang; Weihua Cui; Jiong Ma
Journal:  Planta       Date:  2014-03-25       Impact factor: 4.116

3.  Genetic characterization and barcoding of taxa in the genus Wolffia Horkel ex Schleid. (Lemnaceae) as revealed by two plastidic markers and amplified fragment length polymorphism (AFLP).

Authors:  Manuela Bog; Philipp Schneider; Frank Hellwig; Svea Sachse; Elena Z Kochieva; Elena Martyrosian; Elias Landolt; Klaus-J Appenroth
Journal:  Planta       Date:  2012-10-06       Impact factor: 4.116

4.  Genetic transformation of Indian isolate of Lemna minor mediated by Agrobacterium tumefaciens and recovery of transgenic plants.

Authors:  Gulshan Chhabra; Darshna Chaudhary; Manish Sainger; Pawan K Jaiwal
Journal:  Physiol Mol Biol Plants       Date:  2011-05-11

5.  Sequence-guided approach to genotyping plant clones and species using polymorphic NB-ARC-related genes.

Authors:  Philomena Chu; Glen M Wilson; Todd P Michael; Jennifer Vaiciunas; Joshua Honig; Eric Lam
Journal:  Plant Mol Biol       Date:  2018-09-06       Impact factor: 4.076

6.  Comparative transcriptome analysis to investigate the high starch accumulation of duckweed (Landoltia punctata) under nutrient starvation.

Authors:  Xiang Tao; Yang Fang; Yao Xiao; Yan-Ling Jin; Xin-Rong Ma; Yun Zhao; Kai-Ze He; Hai Zhao; Hai-Yan Wang
Journal:  Biotechnol Biofuels       Date:  2013-05-08       Impact factor: 6.040

7.  Flower induction, microscope-aided cross-pollination, and seed production in the duckweed Lemna gibba with discovery of a male-sterile clone.

Authors:  Lili Fu; Meng Huang; Bingying Han; Xuepiao Sun; K Sowjanya Sree; Klaus-J Appenroth; Jiaming Zhang
Journal:  Sci Rep       Date:  2017-06-08       Impact factor: 4.379

8.  Return of the Lemnaceae: duckweed as a model plant system in the genomics and postgenomics era.

Authors:  Kenneth Acosta; Klaus J Appenroth; Ljudmilla Borisjuk; Marvin Edelman; Uwe Heinig; Marcel A K Jansen; Tokitaka Oyama; Buntora Pasaribu; Ingo Schubert; Shawn Sorrels; K Sowjanya Sree; Shuqing Xu; Todd P Michael; Eric Lam
Journal:  Plant Cell       Date:  2021-10-11       Impact factor: 12.085

9.  The first draft genome of the aquatic model plant Lemna minor opens the route for future stress physiology research and biotechnological applications.

Authors:  Arne Van Hoeck; Nele Horemans; Pieter Monsieurs; Hieu Xuan Cao; Hildegarde Vandenhove; Ronny Blust
Journal:  Biotechnol Biofuels       Date:  2015-11-25       Impact factor: 6.040

10.  Integrated analysis of transcriptome and metabolites reveals an essential role of metabolic flux in starch accumulation under nitrogen starvation in duckweed.

Authors:  Changjiang Yu; Xiaowen Zhao; Guang Qi; Zetao Bai; Yu Wang; Shumin Wang; Yubin Ma; Qian Liu; Ruibo Hu; Gongke Zhou
Journal:  Biotechnol Biofuels       Date:  2017-06-26       Impact factor: 6.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.