Literature DB >> 20519581

Connecting the transcription site to the nuclear pore: a multi-tether process that regulates gene expression.

Guennaëlle Dieppois1, Françoise Stutz.   

Abstract

It is now well established that the position of a gene within the nucleus can influence the level of its activity. So far, special emphasis has been placed on the nuclear envelope (NE) as a transcriptionally silent nuclear sub-domain. Recent work, however, indicates that peripheral localization is not always associated with repression, but rather fulfills a dual function in gene expression. In particular, in the yeast Saccharomyces cerevisiae, a large number of highly expressed genes and activated inducible genes preferentially associate with nuclear pore complexes (NPCs), a process that is mediated by transient interactions between the transcribed locus and the NPC. Recent studies aimed at unraveling the molecular basis of this mechanism have revealed that maintenance of genes at the NPC involves multiple tethers at different steps of gene expression. These observations are consistent with tight interconnections between transcription, mRNA processing and export into the cytoplasm, and highlight a role for the NPC in promoting and orchestrating the gene expression process. In this Commentary, we discuss the factors involved in active gene anchoring to the NPC and the diverse emerging roles of the NPC environment in promoting gene expression, focusing on yeast as a model organism.

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Year:  2010        PMID: 20519581     DOI: 10.1242/jcs.053694

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  41 in total

1.  A nucleoporin, Nup60p, affects the nuclear and cytoplasmic localization of ASH1 mRNA in S. cerevisiae.

Authors:  Erin A Powrie; Daniel Zenklusen; Robert H Singer
Journal:  RNA       Date:  2010-10-29       Impact factor: 4.942

Review 2.  The multifunctional nuclear pore complex: a platform for controlling gene expression.

Authors:  Christopher Ptak; John D Aitchison; Richard W Wozniak
Journal:  Curr Opin Cell Biol       Date:  2014-03-22       Impact factor: 8.382

3.  Comparative genomics of proteins involved in RNA nucleocytoplasmic export.

Authors:  Mariana Serpeloni; Newton M Vidal; Samuel Goldenberg; Andréa R Avila; Federico G Hoffmann
Journal:  BMC Evol Biol       Date:  2011-01-11       Impact factor: 3.260

Review 4.  Keeping mRNPs in check during assembly and nuclear export.

Authors:  Evelina Tutucci; Françoise Stutz
Journal:  Nat Rev Mol Cell Biol       Date:  2011-06       Impact factor: 94.444

5.  Catalytically Active Proteasomes Function Predominantly in the Cytosol.

Authors:  Francis Wang Dang; Li Chen; Kiran Madura
Journal:  J Biol Chem       Date:  2016-07-14       Impact factor: 5.157

6.  A critical role of perinuclear filamentous actin in spatial repositioning and mutually exclusive expression of virulence genes in malaria parasites.

Authors:  Qingfeng Zhang; Yufu Huang; Yilong Zhang; Xiaonan Fang; Aurelie Claes; Magalie Duchateau; Abdelkader Namane; Jose-Juan Lopez-Rubio; Weiqing Pan; Artur Scherf
Journal:  Cell Host Microbe       Date:  2011-11-17       Impact factor: 21.023

7.  Nuclear pores protect genome integrity by assembling a premitotic and Mad1-dependent anaphase inhibitor.

Authors:  Veronica Rodriguez-Bravo; John Maciejowski; Jennifer Corona; Håkon Kirkeby Buch; Philippe Collin; Masato T Kanemaki; Jagesh V Shah; Prasad V Jallepalli
Journal:  Cell       Date:  2014-02-27       Impact factor: 41.582

8.  Marker gene tethering by nucleoporins affects gene expression in plants.

Authors:  Sarah Smith; Carla Galinha; Sophie Desset; Frances Tolmie; David Evans; Christophe Tatout; Katja Graumann
Journal:  Nucleus       Date:  2015-12-10       Impact factor: 4.197

9.  Nuclear pores and perinuclear expression sites of var and ribosomal DNA genes correspond to physically distinct regions in Plasmodium falciparum.

Authors:  Julien Guizetti; Rafael Miyazawa Martins; Stéphanie Guadagnini; Aurélie Claes; Artur Scherf
Journal:  Eukaryot Cell       Date:  2013-03-08

Review 10.  Structure and function in the budding yeast nucleus.

Authors:  Angela Taddei; Susan M Gasser
Journal:  Genetics       Date:  2012-09       Impact factor: 4.562

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