Literature DB >> 20516615

Comparative analysis of amino acids and amino-acid derivatives in protein crystallization.

Len Ito1, Kentaro Shiraki, Hiroshi Yamaguchi.   

Abstract

Optimal conditions for protein crystallization are difficult to determine because proteins tend to aggregate in saturated solutions. This study comprehensively evaluates amino acids and amino-acid derivatives as additives for crystallization. This fourth component of the solution increases the probability of crystallization of hen egg-white lysozyme in various precipitants owing to a decrease in aggregation. These results suggest that the addition of certain types of amino acids and amino-acid derivatives, such as Arg, Lys and esterified and amidated amino acids, is a simple method of improving the success rate of protein crystallization.

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Year:  2010        PMID: 20516615      PMCID: PMC2882785          DOI: 10.1107/S1744309110013710

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  20 in total

1.  A method to produce microseed stock for use in the crystallization of biological macromolecules.

Authors:  J R Luft; G T DeTitta
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-05

2.  Biophysical effect of amino acids on the prevention of protein aggregation.

Authors:  Kentaro Shiraki; Motonori Kudou; Shinsuke Fujiwara; Tadayuki Imanaka; Masahiro Takagi
Journal:  J Biochem       Date:  2002-10       Impact factor: 3.387

3.  Renaturation, purification and characterization of recombinant Fab-fragments produced in Escherichia coli.

Authors:  J Buchner; R Rudolph
Journal:  Biotechnology (N Y)       Date:  1991-02

4.  High temperature increases the refolding yield of reduced lysozyme: implication for the productive process for folding.

Authors:  Ryusuke Sakamoto; Shingo Nishikori; Kentaro Shiraki
Journal:  Biotechnol Prog       Date:  2004 Jul-Aug

5.  Crystallization and preliminary X-ray structural studies of human prouroguanylin.

Authors:  Len Ito; Yuji Hidaka; Masaki Okumura; Hironori Konishi; Knut Adermann; Hiroshi Yamaguchi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-05-23

6.  Characterization of precrystallization aggregation of canavalin by dynamic light scattering.

Authors:  W Kadima; A McPherson; M F Dunn; F A Jurnak
Journal:  Biophys J       Date:  1990-01       Impact factor: 4.033

7.  Diagnostic of precipitant for biomacromolecule crystallization by quasi-elastic light-scattering.

Authors:  V Mikol; E Hirsch; R Giegé
Journal:  J Mol Biol       Date:  1990-05-05       Impact factor: 5.469

8.  Amino Acid esters prevent thermal inactivation and aggregation of lysozyme.

Authors:  Kentaro Shiraki; Motonori Kudou; Ryusuke Sakamoto; Itaru Yanagihara; Masahiro Takagi
Journal:  Biotechnol Prog       Date:  2005 Mar-Apr

9.  An experiment regarding crystallization of soluble proteins in the presence of beta-octyl glucoside.

Authors:  A McPherson; S Koszelak; H Axelrod; J Day; R Williams; L Robinson; M McGrath; D Cascio
Journal:  J Biol Chem       Date:  1986-02-05       Impact factor: 5.157

10.  Effect of amino acids and amino acid derivatives on crystallization of hemoglobin and ribonuclease A.

Authors:  Len Ito; Toyoaki Kobayashi; Kentaro Shiraki; Hiroshi Yamaguchi
Journal:  J Synchrotron Radiat       Date:  2008-04-18       Impact factor: 2.616

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  3 in total

1.  Amino acids and glycine ethyl ester as new crystallization reagents for lysozyme.

Authors:  Len Ito; Kentaro Shiraki; Hiroshi Yamaguchi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-05-27

2.  Glutathione ethylester, a novel protein refolding reagent, enhances both the efficiency of refolding and correct disulfide formation.

Authors:  Len Ito; Masaki Okumura; Kohsaku Tao; Yusuke Kasai; Shunsuke Tomita; Akiko Oosuka; Hidetoshi Yamada; Tomohisa Shibano; Kentaro Shiraki; Takashi Kumasaka; Hiroshi Yamaguchi
Journal:  Protein J       Date:  2012-08       Impact factor: 2.371

3.  Thermal aggregation of hen egg white proteins in the presence of salts.

Authors:  Kazuki Iwashita; Naoto Inoue; Akihiro Handa; Kentaro Shiraki
Journal:  Protein J       Date:  2015-06       Impact factor: 2.371

  3 in total

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