Literature DB >> 20516127

Nuclear stress bodies.

Giuseppe Biamonti1, Claire Vourc'h.   

Abstract

Nuclear stress bodies (nSBs) are unique subnuclear organelles which form in response to heat shock. They are initiated through a direct interaction between heat shock transcription factor 1 (HSF1) and pericentric tandem repeats of satellite III sequences and correspond to active transcription sites for noncoding satellite III transcripts. Given their unusual features, nSBs are distinct from other known transcription sites. In stressed cells, they are thought to participate in rapid, transient, and global reprogramming of gene expression through different types of mechanisms including chromatin remodeling and trapping of transcription and splicing factors. The analysis of these atypical and intriguing structures uncovers new facets of the relationship between nuclear organization and nuclear function.

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Year:  2010        PMID: 20516127      PMCID: PMC2869524          DOI: 10.1101/cshperspect.a000695

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  68 in total

1.  Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers.

Authors:  Nick Gilbert; Shelagh Boyle; Heike Fiegler; Kathryn Woodfine; Nigel P Carter; Wendy A Bickmore
Journal:  Cell       Date:  2004-09-03       Impact factor: 41.582

Review 2.  Stressed out! Effects of environmental stress on mRNA metabolism.

Authors:  Ursula Bond
Journal:  FEMS Yeast Res       Date:  2006-03       Impact factor: 2.796

Review 3.  Stress-inducible responses and heat shock proteins: new pharmacologic targets for cytoprotection.

Authors:  R I Morimoto; M G Santoro
Journal:  Nat Biotechnol       Date:  1998-09       Impact factor: 54.908

4.  RNA splicing is interrupted by heat shock and is rescued by heat shock protein synthesis.

Authors:  H J Yost; S Lindquist
Journal:  Cell       Date:  1986-04-25       Impact factor: 41.582

Review 5.  Stress-induced activation of the heat-shock response: cell and molecular biology of heat-shock factors.

Authors:  J J Cotto; R I Morimoto
Journal:  Biochem Soc Symp       Date:  1999

6.  Rapid and reversible relocalization of heat shock factor 1 within seconds to nuclear stress granules.

Authors:  C Jolly; Y Usson; R I Morimoto
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

7.  Structural and functional characterization of noncoding repetitive RNAs transcribed in stressed human cells.

Authors:  Rut Valgardsdottir; Ilaria Chiodi; Manuela Giordano; Fabio Cobianchi; Silvano Riva; Giuseppe Biamonti
Journal:  Mol Biol Cell       Date:  2005-03-23       Impact factor: 4.138

8.  A novel hnRNP protein (HAP/SAF-B) enters a subset of hnRNP complexes and relocates in nuclear granules in response to heat shock.

Authors:  F Weighardt; F Cobianchi; L Cartegni; I Chiodi; A Villa; S Riva; G Biamonti
Journal:  J Cell Sci       Date:  1999-05       Impact factor: 5.285

9.  Intron-independent association of splicing factors with active genes.

Authors:  C Jolly; C Vourc'h; M Robert-Nicoud; R I Morimoto
Journal:  J Cell Biol       Date:  1999-06-14       Impact factor: 10.539

10.  Is chromosome 9 loss a marker of disease recurrence in transitional cell carcinoma of the urinary bladder?

Authors:  J M Bartlett; A D Watters; S A Ballantyne; J J Going; K M Grigor; T G Cooke
Journal:  Br J Cancer       Date:  1998-06       Impact factor: 7.640

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  92 in total

1.  Formation of telomeric repeat-containing RNA (TERRA) foci in highly proliferating mouse cerebellar neuronal progenitors and medulloblastoma.

Authors:  Zhong Deng; Zhuo Wang; Chaomei Xiang; Aliah Molczan; Valérie Baubet; Jose Conejo-Garcia; Xiaowei Xu; Paul M Lieberman; Nadia Dahmane
Journal:  J Cell Sci       Date:  2012-05-28       Impact factor: 5.285

2.  Chromatin remodeling complexes in the assembly of long noncoding RNA-dependent nuclear bodies.

Authors:  Tetsuya Kawaguchi; Tetsuro Hirose
Journal:  Nucleus       Date:  2015-12-28       Impact factor: 4.197

Review 3.  Noisy silence: non-coding RNA and heterochromatin formation at repetitive elements.

Authors:  Holger Bierhoff; Anna Postepska-Igielska; Ingrid Grummt
Journal:  Epigenetics       Date:  2013-10-11       Impact factor: 4.528

Review 4.  Environmental influences on RNA processing: Biochemical, molecular and genetic regulators of cellular response.

Authors:  Athma A Pai; Francesca Luca
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-09-14       Impact factor: 9.957

5.  SWI/SNF chromatin-remodeling complexes function in noncoding RNA-dependent assembly of nuclear bodies.

Authors:  Tetsuya Kawaguchi; Akie Tanigawa; Takao Naganuma; Yasuyuki Ohkawa; Sylvie Souquere; Gerard Pierron; Tetsuro Hirose
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-23       Impact factor: 11.205

6.  Unusual semi-extractability as a hallmark of nuclear body-associated architectural noncoding RNAs.

Authors:  Takeshi Chujo; Tomohiro Yamazaki; Tetsuya Kawaguchi; Satoshi Kurosaka; Toru Takumi; Shinichi Nakagawa; Tetsuro Hirose
Journal:  EMBO J       Date:  2017-04-12       Impact factor: 11.598

Review 7.  Long non-coding RNAs: spatial amplifiers that control nuclear structure and gene expression.

Authors:  Jesse M Engreitz; Noah Ollikainen; Mitchell Guttman
Journal:  Nat Rev Mol Cell Biol       Date:  2016-10-26       Impact factor: 94.444

Review 8.  Small RNAs: essential regulators of gene expression and defenses against environmental stresses in plants.

Authors:  Hsiao-Lin V Wang; Julia A Chekanova
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-02-28       Impact factor: 9.957

9.  RNA splicing control: yet another gene regulatory role for long nuclear noncoding RNAs.

Authors:  Xinying Zong; Vidisha Tripathi; Kannanganattu V Prasanth
Journal:  RNA Biol       Date:  2011-11-01       Impact factor: 4.652

Review 10.  Dynamic integration of splicing within gene regulatory pathways.

Authors:  Ulrich Braunschweig; Serge Gueroussov; Alex M Plocik; Brenton R Graveley; Benjamin J Blencowe
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

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