Literature DB >> 20503968

NMR studies uncover alternate substrates for dihydrodipicolinate synthase and suggest that dihydrodipicolinate reductase is also a dehydratase.

Sean R A Devenish1, John W Blunt, Juliet A Gerrard.   

Abstract

Despite extensive effort, the drug target dihydrodipicolinate synthase (DHDPS) continues to evade effective inhibition. We used NMR spectroscopy to examine the substrate specificity of this enzyme and found that two pyruvate analogues previously classified as weak competitive inhibitors were turned over productively by DHDPS. Four other analogues were confirmed not to be substrates. Finally, our examination of the natural product of DHDPS and its degradation revealed that dihydrodipicolinate reductase (DHDPR) possesses previously unrecognized dehydratase activity.

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Year:  2010        PMID: 20503968     DOI: 10.1021/jm100349s

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  11 in total

1.  Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV and the phylogeny of the aminotransferase pathway.

Authors:  Rob A Schmitz; Andreas Dietl; Melanie Müller; Tom Berben; Huub J M Op den Camp; Thomas R M Barends
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2020-04-28       Impact factor: 1.056

2.  Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 Å resolution.

Authors:  Nicholas Mank; Amy Arnette; Vince Klapper; Lesa Offermann; Maksymilian Chruszcz
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-03-20       Impact factor: 1.056

3.  Synthesis and folding of a mirror-image enzyme reveals ambidextrous chaperone activity.

Authors:  Matthew T Weinstock; Michael T Jacobsen; Michael S Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-28       Impact factor: 11.205

4.  4-Hydroxy-tetrahydrodipicolinate reductase from Neisseria gonorrhoeae - structure and interactions with coenzymes and substrate analog.

Authors:  Swanandi Pote; Sarah E Pye; Tyler E Sheahan; Anna Gawlicka-Chruszcz; Karolina A Majorek; Maksymilian Chruszcz
Journal:  Biochem Biophys Res Commun       Date:  2018-08-06       Impact factor: 3.575

5.  Nuclear Ssr4 Is Required for the In Vitro and In Vivo Asexual Cycles and Global Gene Activity of Beauveria bassiana.

Authors:  Wei Shao; Qing Cai; Sen-Miao Tong; Sheng-Hua Ying; Ming-Guang Feng
Journal:  mSystems       Date:  2020-04-21       Impact factor: 6.496

6.  Degradation of the Escherichia coli Essential Proteins DapB and Dxr Results in Oxidative Stress, which Contributes to Lethality through Incomplete Base Excision Repair.

Authors:  Charley C Gruber; Vignesh M P Babu; Kamren Livingston; Heer Joisher; Graham C Walker
Journal:  mBio       Date:  2022-02-08       Impact factor: 7.867

7.  Metabolic Engineering of Corynebacterium glutamicum for Sustainable Production of the Aromatic Dicarboxylic Acid Dipicolinic Acid.

Authors:  Lynn S Schwardmann; Aron K Dransfeld; Thomas Schäffer; Volker F Wendisch
Journal:  Microorganisms       Date:  2022-03-29

8.  A New Perspective on the Antimicrobial Mechanism of Berberine Hydrochloride Against Staphylococcus aureus Revealed by Untargeted Metabolomic Studies.

Authors:  Shu Wu; Kun Yang; Yuhang Hong; Yanju Gong; Jiajia Ni; Ni Yang; Weijun Ding
Journal:  Front Microbiol       Date:  2022-07-13       Impact factor: 6.064

9.  Comparative structural and mechanistic studies of 4-hydroxy-tetrahydrodipicolinate reductases from Mycobacterium tuberculosis and Vibrio vulnificus.

Authors:  Swanandi Pote; Sangita Kachhap; Nicholas J Mank; Leily Daneshian; Vincent Klapper; Sarah Pye; Amy K Arnette; Linda S Shimizu; Tomasz Borowski; Maksymilian Chruszcz
Journal:  Biochim Biophys Acta Gen Subj       Date:  2020-09-24       Impact factor: 3.770

10.  Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana.

Authors:  Michael D W Griffin; Jagan M Billakanti; Akshita Wason; Sabrina Keller; Haydyn D T Mertens; Sarah C Atkinson; Renwick C J Dobson; Matthew A Perugini; Juliet A Gerrard; Frederick Grant Pearce
Journal:  PLoS One       Date:  2012-07-05       Impact factor: 3.240

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