Literature DB >> 20502938

Alkyltransferase-like proteins: molecular switches between DNA repair pathways.

Julie L Tubbs1, John A Tainer.   

Abstract

Alkyltransferase-like proteins (ATLs) play a role in the protection of cells from the biological effects of DNA alkylation damage. Although ATLs share functional motifs with the DNA repair protein and cancer chemotherapy target O⁶-alkylguanine-DNA alkyltransferase, they lack the reactive cysteine residue required for alkyltransferase activity, so its mechanism for cell protection was previously unknown. Here we review recent advances in unraveling the enigmatic cellular protection provided by ATLs against the deleterious effects of DNA alkylation damage. We discuss exciting new evidence that ATLs aid in the repair of DNA O⁶-alkylguanine lesions through a novel repair cross-talk between DNA-alkylation base damage responses and the DNA nucleotide excision repair pathway.

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Year:  2010        PMID: 20502938      PMCID: PMC3088651          DOI: 10.1007/s00018-010-0405-8

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  72 in total

1.  DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination [corrected].

Authors:  C D Mol; T Izumi; S Mitra; J A Tainer
Journal:  Nature       Date:  2000-01-27       Impact factor: 49.962

Review 2.  Conserved structural motifs governing the stoichiometric repair of alkylated DNA by O(6)-alkylguanine-DNA alkyltransferase.

Authors:  D S Daniels; J A Tainer
Journal:  Mutat Res       Date:  2000-08-30       Impact factor: 2.433

3.  Structural and mutational analyses of Deinococcus radiodurans UvrA2 provide insight into DNA binding and damage recognition by UvrAs.

Authors:  Joanna Timmins; Elspeth Gordon; Sofia Caria; Gordon Leonard; Samira Acajjaoui; Mei-Shiue Kuo; Vincent Monchois; Sean McSweeney
Journal:  Structure       Date:  2009-04-15       Impact factor: 5.006

4.  A structural model for the damage-sensing complex in bacterial nucleotide excision repair.

Authors:  Danaya Pakotiprapha; Yi Liu; Gregory L Verdine; David Jeruzalmi
Journal:  J Biol Chem       Date:  2009-03-13       Impact factor: 5.157

5.  Uracil-DNA glycosylase-DNA substrate and product structures: conformational strain promotes catalytic efficiency by coupled stereoelectronic effects.

Authors:  S S Parikh; G Walcher; G D Jones; G Slupphaug; H E Krokan; G M Blackburn; J A Tainer
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

6.  Mre11 dimers coordinate DNA end bridging and nuclease processing in double-strand-break repair.

Authors:  R Scott Williams; Gabriel Moncalian; Jessica S Williams; Yoshiki Yamada; Oliver Limbo; David S Shin; Lynda M Groocock; Dana Cahill; Chiharu Hitomi; Grant Guenther; Davide Moiani; James P Carney; Paul Russell; John A Tainer
Journal:  Cell       Date:  2008-10-03       Impact factor: 41.582

7.  Structures of endonuclease V with DNA reveal initiation of deaminated adenine repair.

Authors:  Bjørn Dalhus; Andrew S Arvai; Ida Rosnes; Øyvind E Olsen; Paul H Backe; Ingrun Alseth; Honghai Gao; Weiguo Cao; John A Tainer; Magnar Bjørås
Journal:  Nat Struct Mol Biol       Date:  2009-01-11       Impact factor: 15.369

Review 8.  Transcription-coupled DNA repair: two decades of progress and surprises.

Authors:  Philip C Hanawalt; Graciela Spivak
Journal:  Nat Rev Mol Cell Biol       Date:  2008-12       Impact factor: 94.444

9.  Wedging out DNA damage.

Authors:  Orlando D Schärer; Arthur J Campbell
Journal:  Nat Struct Mol Biol       Date:  2009-02       Impact factor: 15.369

10.  Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex.

Authors:  Andrea Scrima; Renata Konícková; Bryan K Czyzewski; Yusuke Kawasaki; Philip D Jeffrey; Regina Groisman; Yoshihiro Nakatani; Shigenori Iwai; Nikola P Pavletich; Nicolas H Thomä
Journal:  Cell       Date:  2008-12-26       Impact factor: 41.582

View more
  10 in total

1.  P53 conformational switching for selectivity may reveal a general solution for specific DNA binding.

Authors:  Julie L Tubbs; John A Tainer
Journal:  EMBO J       Date:  2011-06-01       Impact factor: 11.598

Review 2.  DNA repair by reversal of DNA damage.

Authors:  Chengqi Yi; Chuan He
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-01-01       Impact factor: 10.005

Review 3.  XPB and XPD helicases in TFIIH orchestrate DNA duplex opening and damage verification to coordinate repair with transcription and cell cycle via CAK kinase.

Authors:  Jill O Fuss; John A Tainer
Journal:  DNA Repair (Amst)       Date:  2011-05-14

Review 4.  Functional analyses of human DNA repair proteins important for aging and genomic stability using yeast genetics.

Authors:  Monika Aggarwal; Robert M Brosh
Journal:  DNA Repair (Amst)       Date:  2012-02-18

Review 5.  Multifaceted roles of alkyltransferase and related proteins in DNA repair, DNA damage, resistance to chemotherapy, and research tools.

Authors:  Anthony E Pegg
Journal:  Chem Res Toxicol       Date:  2011-04-28       Impact factor: 3.739

6.  Sculpting of DNA at abasic sites by DNA glycosylase homolog mag2.

Authors:  Bjørn Dalhus; Line Nilsen; Hanne Korvald; Joy Huffman; Rune Johansen Forstrøm; Cynthia T McMurray; Ingrun Alseth; John A Tainer; Magnar Bjørås
Journal:  Structure       Date:  2012-12-13       Impact factor: 5.006

7.  Structure-function relationships governing activity and stability of a DNA alkylation damage repair thermostable protein.

Authors:  Giuseppe Perugino; Riccardo Miggiano; Mario Serpe; Antonella Vettone; Anna Valenti; Samarpita Lahiri; Franca Rossi; Mosè Rossi; Menico Rizzi; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2015-07-30       Impact factor: 16.971

8.  Alkyltransferase-like protein (Atl1) distinguishes alkylated guanines for DNA repair using cation-π interactions.

Authors:  Oliver J Wilkinson; Vitaly Latypov; Julie L Tubbs; Christopher L Millington; Rihito Morita; Hannah Blackburn; Andrew Marriott; Gail McGown; Mary Thorncroft; Amanda J Watson; Bernard A Connolly; Jane A Grasby; Ryoji Masui; Christopher A Hunter; John A Tainer; Geoffrey P Margison; David M Williams
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-29       Impact factor: 11.205

9.  Analysis of structural flexibility of damaged DNA using thiol-tethered oligonucleotide duplexes.

Authors:  Masashi Fujita; Shun Watanabe; Mariko Yoshizawa; Junpei Yamamoto; Shigenori Iwai
Journal:  PLoS One       Date:  2015-02-13       Impact factor: 3.240

10.  Alkyltransferase-like protein (eATL) prevents mismatch repair-mediated toxicity induced by O6-alkylguanine adducts in Escherichia coli.

Authors:  Gerard Mazon; Gaëlle Philippin; Jean Cadet; Didier Gasparutto; Mauro Modesti; Robert P Fuchs
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

  10 in total

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