Literature DB >> 20491467

Expedient synthesis of a modular phosphate affinity reagent.

Nicolas P Tilmans1, Casey J Krusemark, Pehr A B Harbury.   

Abstract

Isolation and identification of phosphorylated macromolecules is essential for the deconvolution of most biological regulatory networks. Koike and co-workers recently reported the application of a dinuclear zinc-(pyridylmethyl)amine complex to phosphate-specific affinity purifications and gave it the shorthand name "phos-tag". This complex is valuable for studying phosphorylation because it binds selectively to phosphate dianion in the presence of acidic functional groups at physiological pH, and because the binding is largely independent of molecular context. These properties of phos-tag recommend it for applications in phosphoproteomics, metabolomics, and nucleic acid biology. The catch has been that the molecule is difficult to make and prohibitively expensive to buy. Here, we describe an efficient and inexpensive synthesis of a phos-tag derivative with a versatile alkyne handle. The alkyne handle allows for attachment of phos-tag to alkyl azides via the copper(I)-catalyzed azide-alkyne cycloaddition reaction ("click chemistry"). We characterize the phosphate binding behavior of the new phos-tag derivative in a variety of experimental assays, including its conjugation to a fluorescent reporter, to acrylamide gels, and to sepharose chromatography resin. The synthesis we report should enable a broader use of phos-tag for phosphate-related biochemistry, as both an analytical and a preparative reagent.

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Year:  2010        PMID: 20491467      PMCID: PMC2888594          DOI: 10.1021/bc900538b

Source DB:  PubMed          Journal:  Bioconjug Chem        ISSN: 1043-1802            Impact factor:   4.774


  14 in total

Review 1.  Oncogenic kinase signalling.

Authors:  P Blume-Jensen; T Hunter
Journal:  Nature       Date:  2001-05-17       Impact factor: 49.962

2.  Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry of phosphorylated compounds using a novel phosphate capture molecule.

Authors:  Hironori Takeda; Akihiko Kawasaki; Makoto Takahashi; Atsushi Yamada; Tohru Koike
Journal:  Rapid Commun Mass Spectrom       Date:  2003       Impact factor: 2.419

Review 3.  Current methods for phosphoprotein isolation and enrichment.

Authors:  Stefan R Schmidt; Fritz Schweikart; Martin E Andersson
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2006-10-10       Impact factor: 3.205

4.  Mechanistic Studies of the Formation and Decay of Diiron(III) Peroxo Complexes in the Reaction of Diiron(II) Precursors with Dioxygen.

Authors:  Andrew L. Feig; Michael Becker; Siegfried Schindler; Rudi van Eldik; Stephen J. Lippard
Journal:  Inorg Chem       Date:  1996-04-24       Impact factor: 5.165

5.  Separation and detection of large phosphoproteins using Phos-tag SDS-PAGE.

Authors:  Eiji Kinoshita; Emiko Kinoshita-Kikuta; Tohru Koike
Journal:  Nat Protoc       Date:  2009-09-24       Impact factor: 13.491

6.  Improved method of phosphopeptides enrichment using biphasic phosphate-binding tag/C18 tip for versatile analysis of phosphorylation dynamics.

Authors:  Takuji Nabetani; Yeon-Jeong Kim; Masaki Watanabe; Yoko Ohashi; Hiroyuki Kamiguchi; Yoshio Hirabayashi
Journal:  Proteomics       Date:  2009-12       Impact factor: 3.984

7.  PhosphoBase, a database of phosphorylation sites: release 2.0.

Authors:  A Kreegipuu; N Blom; S Brunak
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

Review 8.  The mitogen-activated protein kinase signal transduction pathway.

Authors:  R J Davis
Journal:  J Biol Chem       Date:  1993-07-15       Impact factor: 5.157

9.  Novel immobilized zinc(II) affinity chromatography for phosphopeptides and phosphorylated proteins.

Authors:  Eiji Kinoshita; Atsushi Yamada; Hironori Takeda; Emiko Kinoshita-Kikuta; Tohru Koike
Journal:  J Sep Sci       Date:  2005-02       Impact factor: 3.645

10.  A Phos-tag-based fluorescence resonance energy transfer system for the analysis of the dephosphorylation of phosphopeptides.

Authors:  Kei Takiyama; Eiji Kinoshita; Emiko Kinoshita-Kikuta; Yoshitake Fujioka; Yusuke Kubo; Tohru Koike
Journal:  Anal Biochem       Date:  2009-03-10       Impact factor: 3.365

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