Literature DB >> 9847189

PhosphoBase, a database of phosphorylation sites: release 2.0.

A Kreegipuu1, N Blom, S Brunak.   

Abstract

PhosphoBase contains information about phosphorylated residues in proteins and data about peptide phosphorylation by a variety of protein kinases. The data are collected from literature and compiled into a common format. The current release of PhosphoBase (October 1998, version 2.0) comprises 414 phosphoprotein entries covering 1052 phosphorylatable serine, threonine and tyrosine residues. The kinetic data from peptide phosphorylation assays for approximately 330 oligopeptides is also included. The database entries are cross-referenced to the corresponding records in the Swiss-Prot protein database and literature references are linked to MedLine records. PhosphoBase is available via the WWW at http://www.cbs.dtu. dk/databases/PhosphoBase/

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Year:  1999        PMID: 9847189      PMCID: PMC148144          DOI: 10.1093/nar/27.1.237

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  69 in total

1.  Expression and characterization of the Borna disease virus polymerase.

Authors:  M P Walker; I Jordan; T Briese; N Fischer; W I Lipkin
Journal:  J Virol       Date:  2000-05       Impact factor: 5.103

2.  Glycogen synthase kinase 3 phosphorylates kinesin light chains and negatively regulates kinesin-based motility.

Authors:  Gerardo Morfini; Györgyi Szebenyi; Ravindhra Elluru; Nancy Ratner; Scott T Brady
Journal:  EMBO J       Date:  2002-02-01       Impact factor: 11.598

3.  New insights into the pleiotropic drug resistance network from genome-wide characterization of the YRR1 transcription factor regulation system.

Authors:  Stéphane Le Crom; Frédéric Devaux; Philippe Marc; Xiaoting Zhang; W Scott Moye-Rowley; Claude Jacq
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

4.  WW domain sequence activity relationships identified using ligand recognition propensities of 42 WW domains.

Authors:  Livia Otte; Urs Wiedemann; Brigitte Schlegel; José Ricardo Pires; Michael Beyermann; Peter Schmieder; Gerd Krause; Rudolf Volkmer-Engert; Jens Schneider-Mergener; Hartmut Oschkinat
Journal:  Protein Sci       Date:  2003-03       Impact factor: 6.725

5.  Structural basis and prediction of substrate specificity in protein serine/threonine kinases.

Authors:  Ross I Brinkworth; Robert A Breinl; Bostjan Kobe
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-26       Impact factor: 11.205

6.  ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins.

Authors:  Pål Puntervoll; Rune Linding; Christine Gemünd; Sophie Chabanis-Davidson; Morten Mattingsdal; Scott Cameron; David M A Martin; Gabriele Ausiello; Barbara Brannetti; Anna Costantini; Fabrizio Ferrè; Vincenza Maselli; Allegra Via; Gianni Cesareni; Francesca Diella; Giulio Superti-Furga; Lucjan Wyrwicz; Chenna Ramu; Caroline McGuigan; Rambabu Gudavalli; Ivica Letunic; Peer Bork; Leszek Rychlewski; Bernhard Küster; Manuela Helmer-Citterich; William N Hunter; Rein Aasland; Toby J Gibson
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

7.  The structure of the cell cycle protein Cdc14 reveals a proline-directed protein phosphatase.

Authors:  Christopher H Gray; Valerie M Good; Nicholas K Tonks; David Barford
Journal:  EMBO J       Date:  2003-07-15       Impact factor: 11.598

8.  Profiling of generic anti-phosphopeptide antibodies and kinases with peptide microarrays using radioactive and fluorescence-based assays.

Authors:  Sören Panse; Liying Dong; Antje Burian; Robert Carus; Mike Schutkowski; Ulf Reimer; Jens Schneider-Mergener
Journal:  Mol Divers       Date:  2004       Impact factor: 2.943

9.  Cell-specific phosphorylation of Zfhep transcription factor.

Authors:  Mary E Costantino; Randi P Stearman; Gregory E Smith; Douglas S Darling
Journal:  Biochem Biophys Res Commun       Date:  2002-08-16       Impact factor: 3.575

10.  NKX3.1 is regulated by protein kinase CK2 in prostate tumor cells.

Authors:  Xiang Li; Bin Guan; Sam Maghami; Charles J Bieberich
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

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