Literature DB >> 20488249

Information mapping with pattern classifiers: a comparative study.

Francisco Pereira1, Matthew Botvinick.   

Abstract

Information mapping using pattern classifiers has become increasingly popular in recent years, although without a clear consensus on which classifier(s) ought to be used or how results should be tested. This paper addresses each of these questions, both analytically and through comparative analyses on five empirical datasets. We also describe how information maps in multiple class situations can provide information concerning the content of neural representations. Finally, we introduce a publically available software toolbox designed specifically for information mapping.
Copyright © 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20488249      PMCID: PMC2975047          DOI: 10.1016/j.neuroimage.2010.05.026

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  19 in total

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Authors:  Polina Golland; Bruce Fischl
Journal:  Inf Process Med Imaging       Date:  2003-07

2.  A shrinkage approach to large-scale covariance matrix estimation and implications for functional genomics.

Authors:  Juliane Schäfer; Korbinian Strimmer
Journal:  Stat Appl Genet Mol Biol       Date:  2005-11-14

3.  Beyond mind-reading: multi-voxel pattern analysis of fMRI data.

Authors:  Kenneth A Norman; Sean M Polyn; Greg J Detre; James V Haxby
Journal:  Trends Cogn Sci       Date:  2006-08-08       Impact factor: 20.229

Review 4.  Decoding mental states from brain activity in humans.

Authors:  John-Dylan Haynes; Geraint Rees
Journal:  Nat Rev Neurosci       Date:  2006-07       Impact factor: 34.870

5.  Brain reading using full brain support vector machines for object recognition: there is no "face" identification area.

Authors:  Stephen José Hanson; Yaroslav O Halchenko
Journal:  Neural Comput       Date:  2008-02       Impact factor: 2.026

Review 6.  Revealing representational content with pattern-information fMRI--an introductory guide.

Authors:  Marieke Mur; Peter A Bandettini; Nikolaus Kriegeskorte
Journal:  Soc Cogn Affect Neurosci       Date:  2009-01-17       Impact factor: 3.436

7.  Approximate Statistical Tests for Comparing Supervised Classification Learning Algorithms.

Authors: 
Journal:  Neural Comput       Date:  1998-09-15       Impact factor: 2.026

8.  Spatial and temporal limits in cognitive neuroimaging with fMRI.

Authors: 
Journal:  Trends Cogn Sci       Date:  1999-06       Impact factor: 20.229

9.  Distributed and overlapping representations of faces and objects in ventral temporal cortex.

Authors:  J V Haxby; M I Gobbini; M L Furey; A Ishai; J L Schouten; P Pietrini
Journal:  Science       Date:  2001-09-28       Impact factor: 47.728

10.  PyMVPA: A python toolbox for multivariate pattern analysis of fMRI data.

Authors:  Michael Hanke; Yaroslav O Halchenko; Per B Sederberg; Stephen José Hanson; James V Haxby; Stefan Pollmann
Journal:  Neuroinformatics       Date:  2009-01-28
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  50 in total

1.  Higher level visual cortex represents retinotopic, not spatiotopic, object location.

Authors:  Julie D Golomb; Nancy Kanwisher
Journal:  Cereb Cortex       Date:  2011-12-20       Impact factor: 5.357

2.  Relevant feature set estimation with a knock-out strategy and random forests.

Authors:  Melanie Ganz; Douglas N Greve; Bruce Fischl; Ender Konukoglu
Journal:  Neuroimage       Date:  2015-08-10       Impact factor: 6.556

3.  Single-unit recordings in the macaque face patch system reveal limitations of fMRI MVPA.

Authors:  Julien Dubois; Archy Otto de Berker; Doris Ying Tsao
Journal:  J Neurosci       Date:  2015-02-11       Impact factor: 6.167

4.  Finding Distributed Needles in Neural Haystacks.

Authors:  Christopher R Cox; Timothy T Rogers
Journal:  J Neurosci       Date:  2020-12-17       Impact factor: 6.167

5.  Neural Computations Underlying Causal Structure Learning.

Authors:  Momchil S Tomov; Hayley M Dorfman; Samuel J Gershman
Journal:  J Neurosci       Date:  2018-06-29       Impact factor: 6.167

6.  Classification Accuracy of Neuroimaging Biomarkers in Attention-Deficit/Hyperactivity Disorder: Effects of Sample Size and Circular Analysis.

Authors:  Alfredo A Pulini; Wesley T Kerr; Sandra K Loo; Agatha Lenartowicz
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2018-06-27

7.  MIDAS: Regionally linear multivariate discriminative statistical mapping.

Authors:  Erdem Varol; Aristeidis Sotiras; Christos Davatzikos
Journal:  Neuroimage       Date:  2018-03-07       Impact factor: 6.556

8.  Subtle predictive movements reveal actions regardless of social context.

Authors:  Emalie G McMahon; Charles Y Zheng; Francisco Pereira; Ray Gonzalez; Leslie G Ungerleider; Maryam Vaziri-Pashkam
Journal:  J Vis       Date:  2019-07-01       Impact factor: 2.240

9.  Multi-voxel pattern analysis of selective representation of visual working memory in ventral temporal and occipital regions.

Authors:  Xufeng Han; Alexander C Berg; Hwamee Oh; Dimitris Samaras; Hoi-Chung Leung
Journal:  Neuroimage       Date:  2013-02-04       Impact factor: 6.556

10.  Multivariate pattern analysis reveals subtle brain anomalies relevant to the cognitive phenotype in neurofibromatosis type 1.

Authors:  João V Duarte; Maria J Ribeiro; Inês R Violante; Gil Cunha; Eduardo Silva; Miguel Castelo-Branco
Journal:  Hum Brain Mapp       Date:  2012-09-11       Impact factor: 5.038

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