Literature DB >> 20487282

Molecular sieving properties of the cytoplasm of Escherichia coli and consequences of osmotic stress.

Jacek T Mika1, Geert van den Bogaart, Liesbeth Veenhoff, Victor Krasnikov, Bert Poolman.   

Abstract

We determined the diffusion coefficients (D) of (macro)molecules of different sizes (from approximately 0.5 to 600 kDa) in the cytoplasm of live Escherichia coli cells under normal osmotic conditions and osmotic upshift. D values decreased with increasing molecular weight of the molecules. Upon osmotic upshift, the decrease in D of NBD-glucose was much smaller than that of macromolecules. Barriers for diffusion were found in osmotically challenged cells only for GFP and larger proteins. These barriers are likely formed by the nucleoid and crowding of the cytoplasm. The cytoplasm of E. coli appears as a meshwork allowing the free passage of small molecules while restricting the diffusion of bigger ones.

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Year:  2010        PMID: 20487282     DOI: 10.1111/j.1365-2958.2010.07201.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  41 in total

1.  Subdiffraction-limit study of Kaede diffusion and spatial distribution in live Escherichia coli.

Authors:  Somenath Bakshi; Benjamin P Bratton; James C Weisshaar
Journal:  Biophys J       Date:  2011-11-15       Impact factor: 4.033

2.  Spatial distribution and diffusive motion of RNA polymerase in live Escherichia coli.

Authors:  Benjamin P Bratton; Rachel A Mooney; James C Weisshaar
Journal:  J Bacteriol       Date:  2011-07-22       Impact factor: 3.490

Review 3.  From water and ions to crowded biomacromolecules: in vivo structuring of a prokaryotic cell.

Authors:  Jan Spitzer
Journal:  Microbiol Mol Biol Rev       Date:  2011-09       Impact factor: 11.056

4.  Diffusion within the cytoplasm: a mesoscale model of interacting macromolecules.

Authors:  Fabio Trovato; Valentina Tozzini
Journal:  Biophys J       Date:  2014-12-02       Impact factor: 4.033

Review 5.  Connecting the dots: the effects of macromolecular crowding on cell physiology.

Authors:  Márcio A Mourão; Joe B Hakim; Santiago Schnell
Journal:  Biophys J       Date:  2014-12-16       Impact factor: 4.033

6.  Resolving Cytosolic Diffusive States in Bacteria by Single-Molecule Tracking.

Authors:  Julian Rocha; Jacqueline Corbitt; Ting Yan; Charles Richardson; Andreas Gahlmann
Journal:  Biophys J       Date:  2019-04-09       Impact factor: 4.033

Review 7.  Microorganisms maintain crowding homeostasis.

Authors:  Jonas van den Berg; Arnold J Boersma; Bert Poolman
Journal:  Nat Rev Microbiol       Date:  2017-03-27       Impact factor: 60.633

8.  In vivo biochemistry in bacterial cells using FRAP: insight into the translation cycle.

Authors:  Paula Montero Llopis; Oleksii Sliusarenko; Jennifer Heinritz; Christine Jacobs-Wagner
Journal:  Biophys J       Date:  2012-11-07       Impact factor: 4.033

9.  The cellular environment stabilizes adenine riboswitch RNA structure.

Authors:  Jillian Tyrrell; Jennifer L McGinnis; Kevin M Weeks; Gary J Pielak
Journal:  Biochemistry       Date:  2013-11-20       Impact factor: 3.162

10.  Regulation of acetate kinase isozymes and its importance for mixed-acid fermentation in Lactococcus lactis.

Authors:  Pranav Puri; Anisha Goel; Agnieszka Bochynska; Bert Poolman
Journal:  J Bacteriol       Date:  2014-01-24       Impact factor: 3.490

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