Literature DB >> 20484663

The role of small non-coding RNAs in genome stability and chromatin organization.

Josien C van Wolfswinkel1, René F Ketting.   

Abstract

Small non-coding RNAs make up much of the RNA content of a cell and have the potential to regulate gene expression on many different levels. Initial discoveries in the 1990s and early 21st century focused on determining mechanisms of post-transcriptional regulation mediated by small-interfering RNAs (siRNAs) and microRNAs (miRNAs). More recent research, however, has identified new classes of RNAs and new regulatory mechanisms, expanding the known regulatory potential of small non-coding RNAs to encompass chromatin regulation. In this Commentary, we provide an overview of these chromatin-related mechanisms and speculate on the extent to which they are conserved among eukaryotes.

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Year:  2010        PMID: 20484663     DOI: 10.1242/jcs.061713

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  57 in total

Review 1.  PIWI-interacting RNAs: from generation to transgenerational epigenetics.

Authors:  Maartje J Luteijn; René F Ketting
Journal:  Nat Rev Genet       Date:  2013-06-25       Impact factor: 53.242

Review 2.  A multitasking Argonaute: exploring the many facets of C. elegans CSR-1.

Authors:  Christopher J Wedeles; Monica Z Wu; Julie M Claycomb
Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

Review 3.  RITS-connecting transcription, RNA interference, and heterochromatin assembly in fission yeast.

Authors:  Kevin M Creamer; Janet F Partridge
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-03-23       Impact factor: 9.957

4.  MicroRNA cluster 302-367 enhances somatic cell reprogramming by accelerating a mesenchymal-to-epithelial transition.

Authors:  Baojian Liao; Xichen Bao; Longqi Liu; Shipeng Feng; Athanasios Zovoilis; Wenbo Liu; Yanting Xue; Jie Cai; Xiangpeng Guo; Baoming Qin; Ruosi Zhang; Jiayan Wu; Liangxue Lai; Maikun Teng; Liwen Niu; Biliang Zhang; Miguel A Esteban; Duanqing Pei
Journal:  J Biol Chem       Date:  2011-03-22       Impact factor: 5.157

Review 5.  RNA-induced initiation of transcriptional silencing (RITS) complex structure and function.

Authors:  Sonali Bhattacharjee; Benjamin Roche; Robert A Martienssen
Journal:  RNA Biol       Date:  2019-06-18       Impact factor: 4.652

Review 6.  Histone methylation in the nervous system: functions and dysfunctions.

Authors:  Céline Pattaroni; Claire Jacob
Journal:  Mol Neurobiol       Date:  2012-11-17       Impact factor: 5.590

7.  Silent no more: Endogenous small RNA pathways promote gene expression.

Authors:  Christopher J Wedeles; Monica Z Wu; Julie M Claycomb
Journal:  Worm       Date:  2014-04-02

8.  Small RNA library cloning procedure for deep sequencing of specific endogenous siRNA classes in Caenorhabditis elegans.

Authors:  Maria C Ow; Nelson C Lau; Sarah E Hall
Journal:  Methods Mol Biol       Date:  2014

Review 9.  Charity begins at home: non-coding RNA functions in DNA repair.

Authors:  Dipanjan Chowdhury; Young Eun Choi; Marie Eve Brault
Journal:  Nat Rev Mol Cell Biol       Date:  2013-02-06       Impact factor: 94.444

10.  RNAi pathways contribute to developmental history-dependent phenotypic plasticity in C. elegans.

Authors:  Sarah E Hall; Gung-Wei Chirn; Nelson C Lau; Piali Sengupta
Journal:  RNA       Date:  2013-01-17       Impact factor: 4.942

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