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Literature DB >> 20480472

Real-time atomistic description of DNA unfolding.

Alberto Perez¹, Modesto Orozco.

Abstract

Mesh：

Substances：
Solvents
DNA

Year: 2010 PMID： 20480472 DOI： 10.1002/anie.201000593

Source DB: PubMed Journal: Angew Chem Int Ed Engl ISSN： 1433-7851 Impact factor: 15.336

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Cited

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8 in total

1. Temperature effect on poly(dA).poly(dT): molecular dynamics simulation studies of polymeric and oligomeric constructs.

Authors: Sanchita Mukherjee; Sangeeta Kundu; Dhananjay Bhattacharyya
Journal: J Comput Aided Mol Des Date: 2014-05-28 Impact factor: 3.686

2. Temperature-induced melting of double-stranded DNA in the absence and presence of covalently bonded antitumour drugs: insight from molecular dynamics simulations.

Authors: Juan A Bueren-Calabuig; Christophe Giraudon; Carlos M Galmarini; Jean Marc Egly; Federico Gago
Journal: Nucleic Acids Res Date: 2011-07-03 Impact factor: 16.971

3. Melting dynamics of short dsDNA chains in saline solutions.

Authors: Yichen He; Yazhuo Shang; Yu Liu; Shuangliang Zhao; Honglai Liu
Journal: Springerplus Date: 2015-12-15

4. Structural Characterization of Bubbles Formed in DNA Melting: A Monte Carlo Simulation Study.

Authors: Ellen Rieloff; Sandra C C Nunes; Alberto A C C Pais; Marie Skepö
Journal: ACS Omega Date: 2017-05-09

5. Determining Sequence-Dependent DNA Oligonucleotide Hybridization and Dehybridization Mechanisms Using Coarse-Grained Molecular Simulation, Markov State Models, and Infrared Spectroscopy.

Authors: Michael S Jones; Brennan Ashwood; Andrei Tokmakoff; Andrew L Ferguson
Journal: J Am Chem Soc Date: 2021-10-13 Impact factor: 15.419

Real-time atomistic description of DNA unfolding.

1. Temperature effect on poly(dA).poly(dT): molecular dynamics simulation studies of polymeric and oligomeric constructs.

2. Temperature-induced melting of double-stranded DNA in the absence and presence of covalently bonded antitumour drugs: insight from molecular dynamics simulations.

3. Melting dynamics of short dsDNA chains in saline solutions.

4. Structural Characterization of Bubbles Formed in DNA Melting: A Monte Carlo Simulation Study.

5. Determining Sequence-Dependent DNA Oligonucleotide Hybridization and Dehybridization Mechanisms Using Coarse-Grained Molecular Simulation, Markov State Models, and Infrared Spectroscopy.

6. Structure and properties of DNA in apolar solvents.

7. Asymmetric base-pair opening drives helicase unwinding dynamics.

8. DNA minor-groove binder Hoechst 33258 destabilizes base-pairing adjacent to its binding site.