Literature DB >> 20480395

High-resolution melting analysis, a simple and effective method for reliable mutation scanning and frequency studies in the ACADVL gene.

Rikke Katrine Jentoft Olsen1, Steven F Dobrowolski, Margrethe Kjeldsen, David Hougaard, Henrik Simonsen, Niels Gregersen, Brage Storstein Andresen.   

Abstract

Expanded newborn screening uses tandem mass spectrometry (MS/MS) to identify patients affected with fatty acid oxidation defects by the presence of pathological acylcarnitine esters. A caveat to MS/MS assessment is that cut-off values for disease-specific acylcarnitines does not always clearly discriminate affected patients from carriers and healthy individuals. Diagnostic evaluation of screening-positive samples is required to confirm a metabolic deficiency. With MS/MS newborn screening becoming established in a growing number of countries, streamlined means for time- and -effective follow-on diagnostic evaluation is essential. Moreover, studies to evaluate the diagnostic accuracy of MS/MS newborn screening are needed for determination and adjustment of precise cut-off values for the disease-specific acylcarnitines. In the current study, we use the fatty acid oxidation disorder very-long-chain acyl-CoA dehydrogenase deficiency (VLCADD), the second most common fatty acid oxidation disorder detected by expanded newborn screening, to demonstrate accurate and fast diagnostic evaluation of the ACADVL gene utilizing DNA extracted from the newborn screening dried blood spot and high resolution melt (HRM) profiling. We also demonstrate that HRM is a very effective means to determine carrier frequency of prevalent ACADVL mutations in the general population. Based on estimates of the expected disease incidence, we discuss the diagnostic accuracy of MS/MS-based newborn screening to identify VLCADD in Denmark.

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Year:  2010        PMID: 20480395     DOI: 10.1007/s10545-010-9101-y

Source DB:  PubMed          Journal:  J Inherit Metab Dis        ISSN: 0141-8955            Impact factor:   4.982


  30 in total

1.  High-resolution DNA melting analysis for simultaneous mutation scanning and genotyping in solution.

Authors:  Luming Zhou; Lesi Wang; Robert Palais; Robert Pryor; Carl T Wittwer
Journal:  Clin Chem       Date:  2005-10       Impact factor: 8.327

2.  Pitfalls of neonatal screening for very-long-chain acyl-CoA dehydrogenase deficiency using tandem mass spectrometry.

Authors:  Ina Schymik; Michaela Liebig; Martina Mueller; Udo Wendel; Ertan Mayatepek; Arnold W Strauss; Ronald J A Wanders; Ute Spiekerkoetter
Journal:  J Pediatr       Date:  2006-07       Impact factor: 4.406

Review 3.  High-resolution DNA melting analysis for simple and efficient molecular diagnostics.

Authors:  Gudrun H Reed; Jana O Kent; Carl T Wittwer
Journal:  Pharmacogenomics       Date:  2007-06       Impact factor: 2.533

4.  Unlabeled oligonucleotides as internal temperature controls for genotyping by amplicon melting.

Authors:  Michael T Seipp; Jacob D Durtschi; Michael A Liew; Jamie Williams; Kristy Damjanovich; Genevieve Pont-Kingdon; Elaine Lyon; Karl V Voelkerding; Carl T Wittwer
Journal:  J Mol Diagn       Date:  2007-07       Impact factor: 5.568

Review 5.  High resolution melting applications for clinical laboratory medicine.

Authors:  Maria Erali; Karl V Voelkerding; Carl T Wittwer
Journal:  Exp Mol Pathol       Date:  2008-04-13       Impact factor: 3.362

6.  Molecular heterogeneity in very-long-chain acyl-CoA dehydrogenase deficiency causing pediatric cardiomyopathy and sudden death.

Authors:  A Mathur; H F Sims; D Gopalakrishnan; B Gibson; P Rinaldo; J Vockley; G Hug; A W Strauss
Journal:  Circulation       Date:  1999-03-16       Impact factor: 29.690

7.  A severe genotype with favourable outcome in very long chain acyl-CoA dehydrogenase deficiency.

Authors:  E H Touma; M S Rashed; C Vianey-Saban; A Sakr; P Divry; N Gregersen; B S Andresen
Journal:  Arch Dis Child       Date:  2001-01       Impact factor: 3.791

8.  Clear correlation of genotype with disease phenotype in very-long-chain acyl-CoA dehydrogenase deficiency.

Authors:  B S Andresen; S Olpin; B J Poorthuis; H R Scholte; C Vianey-Saban; R Wanders; L Ijlst; A Morris; M Pourfarzam; K Bartlett; E R Baumgartner; J B deKlerk; L D Schroeder; T J Corydon; H Lund; V Winter; P Bross; L Bolund; N Gregersen
Journal:  Am J Hum Genet       Date:  1999-02       Impact factor: 11.025

9.  Screening newborns for inborn errors of metabolism by tandem mass spectrometry.

Authors:  Bridget Wilcken; Veronica Wiley; Judith Hammond; Kevin Carpenter
Journal:  N Engl J Med       Date:  2003-06-05       Impact factor: 91.245

10.  Mutations in the phenylalanine hydroxylase gene identified in 95 patients with phenylketonuria using novel systems of mutation scanning and specific genotyping based upon thermal melt profiles.

Authors:  Steven F Dobrowolski; Clinton Ellingson; Thomas Coyne; Jesse Grey; Ranae Martin; Edwin W Naylor; Richard Koch; Harvey L Levy
Journal:  Mol Genet Metab       Date:  2007-05-14       Impact factor: 4.797

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  4 in total

1.  High-resolution melt as a screening method in autosomal dominant polycystic kidney disease (ADPKD).

Authors:  Grazia Maria Virzì; Alice Bruson; Valentina Corradi; Fiorella Gastaldon; Massimo de Cal; Marta Donà; Dinna N Cruz; Maurizio Clementi; Claudio Ronco
Journal:  J Clin Lab Anal       Date:  2014-03-22       Impact factor: 2.352

2.  Molecular and cellular pathology of very-long-chain acyl-CoA dehydrogenase deficiency.

Authors:  Manuel Schiff; Al-Walid Mohsen; Anuradha Karunanidhi; Elizabeth McCracken; Renita Yeasted; Jerry Vockley
Journal:  Mol Genet Metab       Date:  2013-02-13       Impact factor: 4.797

3.  TNNT1 nemaline myopathy: natural history and therapeutic frontier.

Authors:  Michael D Fox; Vincent J Carson; Han-Zhong Feng; Michael W Lawlor; John T Gray; Karlla W Brigatti; J-P Jin; Kevin A Strauss
Journal:  Hum Mol Genet       Date:  2018-09-15       Impact factor: 6.150

4.  Is high resolution melting analysis (HRMA) accurate for detection of human disease-associated mutations? A meta analysis.

Authors:  Bing-Sheng Li; Xin-Ying Wang; Feng-Li Ma; Bo Jiang; Xiao-Xiao Song; An-Gao Xu
Journal:  PLoS One       Date:  2011-12-14       Impact factor: 3.240

  4 in total

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