Literature DB >> 20472561

Mapping flexibility and the assembly switch of cell division protein FtsZ by computational and mutational approaches.

Antonio J Martín-Galiano1, Rubén M Buey, Marta Cabezas, José M Andreu.   

Abstract

The molecular switch for nucleotide-regulated assembly and disassembly of the main prokaryotic cell division protein FtsZ is unknown despite the numerous crystal structures that are available. We have characterized the functional motions in FtsZ with a computational consensus of essential dynamics, structural comparisons, sequence conservation, and networks of co-evolving residues. Employing this information, we have constructed 17 mutants, which alter the FtsZ functional cycle at different stages, to modify FtsZ flexibility. The mutant phenotypes ranged from benign to total inactivation and included increased GTPase, reduced assembly, and stabilized assembly. Six mutations clustering at the long cleft between the C-terminal beta-sheet and core helix H7 deviated FtsZ assembly into curved filaments with inhibited GTPase, which still polymerize cooperatively. These mutations may perturb the predicted closure of the C-terminal domain onto H7 required for switching between curved and straight association modes and for GTPase activation. By mapping the FtsZ assembly switch, this work also gives insight into FtsZ druggability because the curved mutations delineate the putative binding site of the promising antibacterial FtsZ inhibitor PC190723.

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Year:  2010        PMID: 20472561      PMCID: PMC2903349          DOI: 10.1074/jbc.M110.117127

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  66 in total

1.  Tubulin-like protofilaments in Ca2+-induced FtsZ sheets.

Authors:  J Löwe; L A Amos
Journal:  EMBO J       Date:  1999-05-04       Impact factor: 11.598

2.  Activation of cell division protein FtsZ. Control of switch loop T3 conformation by the nucleotide gamma-phosphate.

Authors:  J F Díaz; A Kralicek; J Mingorance; J M Palacios; M Vicente; J M Andreu
Journal:  J Biol Chem       Date:  2001-01-25       Impact factor: 5.157

3.  The TIGRFAMs database of protein families.

Authors:  Daniel H Haft; Jeremy D Selengut; Owen White
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

4.  Assembly of archaeal cell division protein FtsZ and a GTPase-inactive mutant into double-stranded filaments.

Authors:  María A Oliva; Sonia Huecas; Juan M Palacios; Jaime Martín-Benito; José M Valpuesta; José M Andreu
Journal:  J Biol Chem       Date:  2003-06-14       Impact factor: 5.157

5.  Energetics of the cooperative assembly of cell division protein FtsZ and the nucleotide hydrolysis switch.

Authors:  Sonia Huecas; José Manuel Andreu
Journal:  J Biol Chem       Date:  2003-08-21       Impact factor: 5.157

6.  New temperature-sensitive alleles of ftsZ in Escherichia coli.

Authors:  Stephen G Addinall; Elaine Small; Duncan Whitaker; Shane Sturrock; William D Donachie; Medhat M Khattar
Journal:  J Bacteriol       Date:  2005-01       Impact factor: 3.490

7.  Mutants of FtsZ targeting the protofilament interface: effects on cell division and GTPase activity.

Authors:  Sambra D Redick; Jesse Stricker; Gina Briscoe; Harold P Erickson
Journal:  J Bacteriol       Date:  2005-04       Impact factor: 3.490

Review 8.  Profile hidden Markov models.

Authors:  S R Eddy
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

9.  Reversible unfolding of FtsZ cell division proteins from archaea and bacteria. Comparison with eukaryotic tubulin folding and assembly.

Authors:  Jose Manuel Andreu; Maria Angela Oliva; Octavio Monasterio
Journal:  J Biol Chem       Date:  2002-09-04       Impact factor: 5.157

10.  Site-specific mutations of FtsZ--effects on GTPase and in vitro assembly.

Authors:  C Lu; J Stricker; H P Erickson
Journal:  BMC Microbiol       Date:  2001-05-24       Impact factor: 3.605

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  16 in total

1.  Conformational changes of FtsZ reported by tryptophan mutants.

Authors:  Yaodong Chen; Harold P Erickson
Journal:  Biochemistry       Date:  2011-05-03       Impact factor: 3.162

2.  Nucleotide-dependent conformations of FtsZ dimers and force generation observed through molecular dynamics simulations.

Authors:  Jen Hsin; Ajay Gopinathan; Kerwyn C Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-30       Impact factor: 11.205

Review 3.  FtsZ in bacterial cytokinesis: cytoskeleton and force generator all in one.

Authors:  Harold P Erickson; David E Anderson; Masaki Osawa
Journal:  Microbiol Mol Biol Rev       Date:  2010-12       Impact factor: 11.056

4.  Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop.

Authors:  Takashi Matsui; Xuerong Han; Jian Yu; Min Yao; Isao Tanaka
Journal:  J Biol Chem       Date:  2013-12-17       Impact factor: 5.157

5.  Understanding nucleotide-regulated FtsZ filament dynamics and the monomer assembly switch with large-scale atomistic simulations.

Authors:  Erney Ramírez-Aportela; José Ramón López-Blanco; José Manuel Andreu; Pablo Chacón
Journal:  Biophys J       Date:  2014-11-04       Impact factor: 4.033

6.  Studies on the dissociation and urea-induced unfolding of FtsZ support the dimer nucleus polymerization mechanism.

Authors:  Felipe Montecinos-Franjola; Justin A Ross; Susana A Sánchez; Juan E Brunet; Rosalba Lagos; David M Jameson; Octavio Monasterio
Journal:  Biophys J       Date:  2012-05-02       Impact factor: 4.033

7.  A flexible C-terminal linker is required for proper FtsZ assembly in vitro and cytokinetic ring formation in vivo.

Authors:  P J Buske; Petra Anne Levin
Journal:  Mol Microbiol       Date:  2013-06-10       Impact factor: 3.501

Review 8.  An intrinsically disordered linker plays a critical role in bacterial cell division.

Authors:  P J Buske; Anuradha Mittal; Rohit V Pappu; Petra Anne Levin
Journal:  Semin Cell Dev Biol       Date:  2014-10-13       Impact factor: 7.727

9.  Evidence of conformational switch in Streptococcus pneumoniae FtsZ during polymerization.

Authors:  Rachana Rao Battaje; Prajakta Bhondwe; Hemendra Pal Singh Dhaked; Dulal Panda
Journal:  Protein Sci       Date:  2021-01-05       Impact factor: 6.725

10.  A benzamide-dependent ftsZ mutant reveals residues crucial for Z-ring assembly.

Authors:  David William Adams; Ling Juan Wu; Jeff Errington
Journal:  Mol Microbiol       Date:  2015-12-22       Impact factor: 3.501

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