Literature DB >> 20471401

Crystal structure of the first plant urease from jack bean: 83 years of journey from its first crystal to molecular structure.

Anuradha Balasubramanian1, Karthe Ponnuraj.   

Abstract

Urease, a nickel-dependent metalloenzyme, is synthesized by plants, some bacteria, and fungi. It catalyzes the hydrolysis of urea into ammonia and carbon dioxide. Although the amino acid sequences of plant and bacterial ureases are closely related, some biological activities differ significantly. Plant ureases but not bacterial ureases possess insecticidal properties independent of its ureolytic activity. To date, the structural information is available only for bacterial ureases although the jack bean urease (Canavalia ensiformis; JBU), the best-studied plant urease, was the first enzyme to be crystallized in 1926. To better understand the biological properties of plant ureases including the mechanism of insecticidal activity, we initiated the structural studies on some of them. Here, we report the crystal structure of JBU, the first plant urease structure, at 2.05 A resolution. The active-site architecture of JBU is similar to that of bacterial ureases containing a bi-nickel center. JBU has a bound phosphate and covalently modified residue (Cys592) by beta-mercaptoethanol at its active site, and the concomitant binding of multiple inhibitors (phosphate and beta-mercaptoethanol) is not observed so far in bacterial ureases. By correlating the structural information of JBU with the available biophysical and biochemical data on insecticidal properties of plant ureases, we hypothesize that the amphipathic beta-hairpin located in the entomotoxic peptide region of plant ureases might form a membrane insertion beta-barrel as found in beta-pore-forming toxins. 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20471401     DOI: 10.1016/j.jmb.2010.05.009

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  49 in total

1.  Function of UreB in Klebsiella aerogenes urease.

Authors:  Eric L Carter; Jodi L Boer; Mark A Farrugia; Nicholas Flugga; Christopher L Towns; Robert P Hausinger
Journal:  Biochemistry       Date:  2011-10-06       Impact factor: 3.162

2.  Conformational change results in loss of enzymatic activity of jack bean urease on its interaction with silver nanoparticle.

Authors:  Shobana Ponnuvel; Balakumar Subramanian; Karthe Ponnuraj
Journal:  Protein J       Date:  2015-10       Impact factor: 2.371

3.  Assembly of preactivation complex for urease maturation in Helicobacter pylori: crystal structure of UreF-UreH protein complex.

Authors:  Yu Hang Fong; Ho Chun Wong; Chi Pang Chuck; Yu Wai Chen; Hongzhe Sun; Kam-Bo Wong
Journal:  J Biol Chem       Date:  2011-10-19       Impact factor: 5.157

4.  Crystallographic and X-ray absorption spectroscopic characterization of Helicobacter pylori UreE bound to Ni²⁺ and Zn²⁺ reveals a role for the disordered C-terminal arm in metal trafficking.

Authors:  Katarzyna Banaszak; Vlad Martin-Diaconescu; Matteo Bellucci; Barbara Zambelli; Wojciech Rypniewski; Michael J Maroney; Stefano Ciurli
Journal:  Biochem J       Date:  2012-02-01       Impact factor: 3.857

5.  Selectivity of Ni(II) and Zn(II) binding to Sporosarcina pasteurii UreE, a metallochaperone in the urease assembly: a calorimetric and crystallographic study.

Authors:  Barbara Zambelli; Katarzyna Banaszak; Anna Merloni; Agnieszka Kiliszek; Wojciech Rypniewski; Stefano Ciurli
Journal:  J Biol Inorg Chem       Date:  2013-10-15       Impact factor: 3.358

6.  A Thermodynamic Limit on the Role of Self-Propulsion in Enhanced Enzyme Diffusion.

Authors:  Mudong Feng; Michael K Gilson
Journal:  Biophys J       Date:  2019-04-11       Impact factor: 4.033

7.  The crystal structure of Sporosarcina pasteurii urease in a complex with citrate provides new hints for inhibitor design.

Authors:  Stefano Benini; Paulina Kosikowska; Michele Cianci; Luca Mazzei; Antonio Gonzalez Vara; Łukasz Berlicki; Stefano Ciurli
Journal:  J Biol Inorg Chem       Date:  2013-02-15       Impact factor: 3.358

8.  Urease from Helicobacter pylori is inactivated by sulforaphane and other isothiocyanates.

Authors:  Jed W Fahey; Katherine K Stephenson; Kristina L Wade; Paul Talalay
Journal:  Biochem Biophys Res Commun       Date:  2013-04-11       Impact factor: 3.575

Review 9.  Biosynthesis of the urease metallocenter.

Authors:  Mark A Farrugia; Lee Macomber; Robert P Hausinger
Journal:  J Biol Chem       Date:  2013-03-28       Impact factor: 5.157

10.  Nickel binding properties of Helicobacter pylori UreF, an accessory protein in the nickel-based activation of urease.

Authors:  Barbara Zambelli; Andrea Berardi; Vlad Martin-Diaconescu; Luca Mazzei; Francesco Musiani; Michael J Maroney; Stefano Ciurli
Journal:  J Biol Inorg Chem       Date:  2013-11-30       Impact factor: 3.358

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