Literature DB >> 2046664

Translation initiation factor 4A from Saccharomyces cerevisiae: analysis of residues conserved in the D-E-A-D family of RNA helicases.

S R Schmid1, P Linder.   

Abstract

The eukaryotic translation initiation factor 4A (eIF-4A) possesses an in vitro helicase activity that allows the unwinding of double-stranded RNA. This activity is dependent on ATP hydrolysis and the presence of another translation initiation factor, eIF-4B. These two initiation factors are thought to unwind mRNA secondary structures in preparation for ribosome binding and initiation of translation. To further characterize the function of eIF-4A in cellular translation and its interaction with other elements of the translation machinery, we have isolated mutations in the TIF1 and TIF2 genes encoding eIF-4A in Saccharomyces cerevisiae. We show that three highly conserved domains of the D-E-A-D protein family, encoding eIF-4A and other RNA helicases, are essential for protein function. Only in rare cases could we make a conservative substitution without affecting cell growth. The mutants show a clear correlation between their growth and in vivo translation rates. One mutation that results in a temperature-sensitive phenotype reveals an immediate decrease in translation activity following a shift to the nonpermissive temperature. These in vivo results confirm previous in vitro data demonstrating an absolute dependence of translation on the TIF1 and TIF2 gene products.

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Year:  1991        PMID: 2046664      PMCID: PMC361078          DOI: 10.1128/mcb.11.7.3463-3471.1991

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  51 in total

1.  A new superfamily of replicative proteins.

Authors:  T C Hodgman
Journal:  Nature       Date:  1988-05-05       Impact factor: 49.962

2.  Nuclear protein with sequence homology to translation initiation factor eIF-4A.

Authors:  M J Ford; I A Anton; D P Lane
Journal:  Nature       Date:  1988-04-21       Impact factor: 49.962

3.  Cloning of eukaryotic protein synthesis initiation factor genes: isolation and characterization of cDNA clones encoding factor eIF-4A.

Authors:  P J Nielsen; G K McMaster; H Trachsel
Journal:  Nucleic Acids Res       Date:  1985-10-11       Impact factor: 16.971

4.  Mutations at a Zn(II) finger motif in the yeast eIF-2 beta gene alter ribosomal start-site selection during the scanning process.

Authors:  T F Donahue; A M Cigan; E K Pabich; B C Valavicius
Journal:  Cell       Date:  1988-08-26       Impact factor: 41.582

5.  A mitochondrial RNA maturase gene transferred to the yeast nucleus can control mitochondrial mRNA splicing.

Authors:  J Banroques; A Delahodde; C Jacq
Journal:  Cell       Date:  1986-09-12       Impact factor: 41.582

6.  ATP-binding site of adenylate kinase: mechanistic implications of its homology with ras-encoded p21, F1-ATPase, and other nucleotide-binding proteins.

Authors:  D C Fry; S A Kuby; A S Mildvan
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

7.  Translation initiation factor 5A and its hypusine modification are essential for cell viability in the yeast Saccharomyces cerevisiae.

Authors:  J Schnier; H G Schwelberger; Z Smit-McBride; H A Kang; J W Hershey
Journal:  Mol Cell Biol       Date:  1991-06       Impact factor: 4.272

8.  The product of the Drosophila gene vasa is very similar to eukaryotic initiation factor-4A.

Authors:  P F Lasko; M Ashburner
Journal:  Nature       Date:  1988-10-13       Impact factor: 49.962

9.  The mouse protein synthesis initiation factor 4A gene family includes two related functional genes which are differentially expressed.

Authors:  P J Nielsen; H Trachsel
Journal:  EMBO J       Date:  1988-07       Impact factor: 11.598

10.  Identification of two genes coding for the translation elongation factor EF-1 alpha of S. cerevisiae.

Authors:  F Schirmaier; P Philippsen
Journal:  EMBO J       Date:  1984-12-20       Impact factor: 11.598

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  54 in total

1.  Crystallographic structure of the amino terminal domain of yeast initiation factor 4A, a representative DEAD-box RNA helicase.

Authors:  E R Johnson; D B McKay
Journal:  RNA       Date:  1999-12       Impact factor: 4.942

2.  Characterization and mutational analysis of yeast Dbp8p, a putative RNA helicase involved in ribosome biogenesis.

Authors:  M C Daugeron; P Linder
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

3.  Characterization of the cold stress-induced cyanobacterial DEAD-box protein CrhC as an RNA helicase.

Authors:  E Yu; G W Owttrim
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

4.  Comparative analysis of editosome proteins in trypanosomatids.

Authors:  Elizabeth A Worthey; Achim Schnaufer; I Saira Mian; Kenneth Stuart; Reza Salavati
Journal:  Nucleic Acids Res       Date:  2003-11-15       Impact factor: 16.971

5.  Sequence analysis of bacteriophage T4 DNA packaging/terminase genes 16 and 17 reveals a common ATPase center in the large subunit of viral terminases.

Authors:  Michael S Mitchell; Shigenobu Matsuzaki; Shosuke Imai; Venigalla B Rao
Journal:  Nucleic Acids Res       Date:  2002-09-15       Impact factor: 16.971

6.  ATP hydrolysis by initiation factor 4A is required for translation initiation in Saccharomyces cerevisiae.

Authors:  S Blum; S R Schmid; A Pause; P Buser; P Linder; N Sonenberg; H Trachsel
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

Review 7.  Power of yeast for analysis of eukaryotic translation initiation.

Authors:  Michael Altmann; Patrick Linder
Journal:  J Biol Chem       Date:  2010-08-06       Impact factor: 5.157

8.  UAP56 is an important regulator of protein synthesis and growth in cardiomyocytes.

Authors:  Abha Sahni; Nadan Wang; Jeffrey D Alexis
Journal:  Biochem Biophys Res Commun       Date:  2010-01-29       Impact factor: 3.575

9.  Crystal structure and functional analysis of DEAD-box protein Dhh1p.

Authors:  Zhihong Cheng; Jeff Coller; Roy Parker; Haiwei Song
Journal:  RNA       Date:  2005-06-29       Impact factor: 4.942

10.  Bacterial DNA replication initiation factor priA is related to proteins belonging to the 'DEAD-box' family.

Authors:  C A Ouzounis; B J Blencowe
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

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