Literature DB >> 20458355

Surviving an Oxygen Atmosphere: DNA Damage and Repair.

Cynthia J Burrows1.   

Abstract

As a consequence of life's coexistence with the reactive diradical O(2), cells have adapted biochemical defense mechanisms for protection from oxidative damage. Nevertheless, it is estimated that each cell's genomic DNA undergoes thousands of oxidative hits per day, and even more under conditions of stress. Unrepaired oxidative damage to DNA leads to mutations that underlie cancer, aging and neurological disease. Recent studies have helped unravel the oxidation chemistry of the DNA bases, and the myriad biochemical responses of DNA processing enzymes that battle against mutation. On the positive side, oxidative damage to nucleobases may accelerate the evolution of genomes and could have played a role in the ancestry of redox-active nucleoside cofactors as well as the adaptation of early life to changes in the environment.

Entities:  

Year:  2009        PMID: 20458355      PMCID: PMC2865650          DOI: 10.1021/bk-2009-1025.ch008

Source DB:  PubMed          Journal:  ACS Symp Ser Am Chem Soc        ISSN: 0097-6156


  12 in total

Review 1.  Mechanisms of formation, genotoxicity, and mutation of guanine oxidation products.

Authors:  William L Neeley; John M Essigmann
Journal:  Chem Res Toxicol       Date:  2006-04       Impact factor: 3.739

2.  Production of hydrogen peroxide in the atmosphere of a Snowball Earth and the origin of oxygenic photosynthesis.

Authors:  Mao-Chang Liang; Hyman Hartman; Robert E Kopp; Joseph L Kirschvink; Yuk L Yung
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-30       Impact factor: 11.205

Review 3.  Base-excision repair of oxidative DNA damage.

Authors:  Sheila S David; Valerie L O'Shea; Sucharita Kundu
Journal:  Nature       Date:  2007-06-21       Impact factor: 49.962

4.  Characterization of hydantoin products from one-electron oxidation of 8-oxo-7,8-dihydroguanosine in a nucleoside model.

Authors:  W Luo; J G Muller; E M Rachlin; C J Burrows
Journal:  Chem Res Toxicol       Date:  2001-07       Impact factor: 3.739

5.  Characterization of spiroiminodihydantoin as a product of one-electron oxidation of 8-Oxo-7,8-dihydroguanosine.

Authors:  W Luo; J G Muller; E M Rachlin; C J Burrows
Journal:  Org Lett       Date:  2000-03-09       Impact factor: 6.005

Review 6.  Oxidatively generated damage to the guanine moiety of DNA: mechanistic aspects and formation in cells.

Authors:  Jean Cadet; Thierry Douki; Jean-Luc Ravanat
Journal:  Acc Chem Res       Date:  2008-07-31       Impact factor: 22.384

7.  The hydantoin lesions formed from oxidation of 7,8-dihydro-8-oxoguanine are potent sources of replication errors in vivo.

Authors:  Paul T Henderson; James C Delaney; James G Muller; William L Neeley; Steven R Tannenbaum; Cynthia J Burrows; John M Essigmann
Journal:  Biochemistry       Date:  2003-08-12       Impact factor: 3.162

8.  Superior removal of hydantoin lesions relative to other oxidized bases by the human DNA glycosylase hNEIL1.

Authors:  Nirmala Krishnamurthy; Xiaobei Zhao; Cynthia J Burrows; Sheila S David
Journal:  Biochemistry       Date:  2008-06-11       Impact factor: 3.162

9.  Formation of 13C-, 15N-, and 18O-labeled guanidinohydantoin from guanosine oxidation with singlet oxygen. Implications for structure and mechanism.

Authors:  Yu Ye; James G Muller; Wenchen Luo; Charles L Mayne; Anthony J Shallop; Roger A Jones; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2003-11-19       Impact factor: 15.419

10.  DNA-protein cross-links between guanine and lysine depend on the mechanism of oxidation for formation of C5 vs C8 guanosine adducts.

Authors:  Xiaoyun Xu; James G Muller; Yu Ye; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2008-01-16       Impact factor: 15.419

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  4 in total

Review 1.  Biologically relevant oxidants and terminology, classification and nomenclature of oxidatively generated damage to nucleobases and 2-deoxyribose in nucleic acids.

Authors:  Jean Cadet; Steffen Loft; Ryszard Olinski; Mark D Evans; Karol Bialkowski; J Richard Wagner; Peter C Dedon; Peter Møller; Marc M Greenberg; Marcus S Cooke
Journal:  Free Radic Res       Date:  2012-02-22

Review 2.  DNA glycosylases search for and remove oxidized DNA bases.

Authors:  Susan S Wallace
Journal:  Environ Mol Mutagen       Date:  2013-10-07       Impact factor: 3.216

Review 3.  DNA base damage by reactive oxygen species, oxidizing agents, and UV radiation.

Authors:  Jean Cadet; J Richard Wagner
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-02-01       Impact factor: 10.005

4.  Tet oxidizes thymine to 5-hydroxymethyluracil in mouse embryonic stem cell DNA.

Authors:  Toni Pfaffeneder; Fabio Spada; Mirko Wagner; Caterina Brandmayr; Silvia K Laube; David Eisen; Matthias Truss; Jessica Steinbacher; Benjamin Hackner; Olga Kotljarova; David Schuermann; Stylianos Michalakis; Olesea Kosmatchev; Stefan Schiesser; Barbara Steigenberger; Nada Raddaoui; Gengo Kashiwazaki; Udo Müller; Cornelia G Spruijt; Michiel Vermeulen; Heinrich Leonhardt; Primo Schär; Markus Müller; Thomas Carell
Journal:  Nat Chem Biol       Date:  2014-05-18       Impact factor: 15.040

  4 in total

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