Literature DB >> 20457082

Feline non-repetitive mitochondrial DNA control region database for forensic evidence.

R A Grahn1, J D Kurushima, N C Billings, J C Grahn, J L Halverson, E Hammer, C K Ho, T J Kun, J K Levy, M J Lipinski, J M Mwenda, H Ozpinar, R K Schuster, S J Shoorijeh, C R Tarditi, N E Waly, E J Wictum, L A Lyons.   

Abstract

The domestic cat is the one of the most popular pets throughout the world. A by-product of owning, interacting with, or being in a household with a cat is the transfer of shed fur to clothing or personal objects. As trace evidence, transferred cat fur is a relatively untapped resource for forensic scientists. Both phenotypic and genotypic characteristics can be obtained from cat fur, but databases for neither aspect exist. Because cats incessantly groom, cat fur may have nucleated cells, not only in the hair bulb, but also as epithelial cells on the hair shaft deposited during the grooming process, thereby generally providing material for DNA profiling. To effectively exploit cat hair as a resource, representative databases must be established. The current study evaluates 402 bp of the mtDNA control region (CR) from 1394 cats, including cats from 25 distinct worldwide populations and 26 breeds. Eighty-three percent of the cats are represented by 12 major mitotypes. An additional 8.0% are clearly derived from the major mitotypes. Unique sequences are found in 7.5% of the cats. The overall genetic diversity for this data set is 0.8813±0.0046 with a random match probability of 11.8%. This region of the cat mtDNA has discriminatory power suitable for forensic application worldwide.
Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

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Year:  2010        PMID: 20457082      PMCID: PMC2921450          DOI: 10.1016/j.fsigen.2010.01.013

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  45 in total

1.  Extremely high levels of human mitochondrial DNA heteroplasmy in single hair roots.

Authors:  T Grzybowski
Journal:  Electrophoresis       Date:  2000-02       Impact factor: 3.535

2.  Mitochondrial sequence haplotype in the Japanese population.

Authors:  Hiroyoshi Koyama; Mineo Iwasa; Yoshitaka Maeno; Tsukasa Tsuchimochi; Ichiro Isobe; Yoshimi Seko-Nakamura; Jun Monma-Ohtaki; Tomohiro Matsumoto; Shinji Ogawa; Bin Sato; Masataka Nagao
Journal:  Forensic Sci Int       Date:  2002-01-24       Impact factor: 2.395

3.  Results of a collaborative study of the EDNAP group regarding mitochondrial DNA heteroplasmy and segregation in hair shafts.

Authors:  G Tully; S M Barritt; K Bender; E Brignon; C Capelli; N Dimo-Simonin; C Eichmann; C M Ernst; C Lambert; M V Lareu; B Ludes; B Mevag; W Parson; H Pfeiffer; A Salas; P M Schneider; E Staalstrom
Journal:  Forensic Sci Int       Date:  2004-02-10       Impact factor: 2.395

4.  Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

Authors:  F Tajima
Journal:  Genetics       Date:  1989-11       Impact factor: 4.562

5.  Molecular evidence for species-level distinctions in clouded leopards.

Authors:  Valerie A Buckley-Beason; Warren E Johnson; Willliam G Nash; Roscoe Stanyon; Joan C Menninger; Carlos A Driscoll; JoGayle Howard; Mitch Bush; John E Page; Melody E Roelke; Gary Stone; Paolo P Martelli; Ci Wen; Lin Ling; Ratna K Duraisingam; Phan V Lam; Stephen J O'Brien
Journal:  Curr Biol       Date:  2006-12-05       Impact factor: 10.834

Review 6.  Human hair histogenesis for the mitochondrial DNA forensic scientist.

Authors:  C A Linch; D A Whiting; M M Holland
Journal:  J Forensic Sci       Date:  2001-07       Impact factor: 1.832

7.  Complete nucleotide sequences of the domestic cat (Felis catus) mitochondrial genome and a transposed mtDNA tandem repeat (Numt) in the nuclear genome.

Authors:  J V Lopez; S Cevario; S J O'Brien
Journal:  Genomics       Date:  1996-04-15       Impact factor: 5.736

8.  Phylogeographic patterns and evolution of the mitochondrial DNA control region in two neotropical cats (Mammalia, felidae).

Authors:  E Eizirik; S L Bonatto; W E Johnson; P G Crawshaw; J C Vié; D M Brousset; S J O'Brien; F M Salzano
Journal:  J Mol Evol       Date:  1998-11       Impact factor: 2.395

9.  Mitochondrial DNA analysis of the domestic dog: control region variation within and among breeds.

Authors:  Rebekah L Gundry; Marc W Allard; Tamyra R Moretti; Rodney L Honeycutt; Mark R Wilson; Keith L Monson; David R Foran
Journal:  J Forensic Sci       Date:  2007-05       Impact factor: 1.832

10.  An international parentage and identification panel for the domestic cat (Felis catus).

Authors:  M J Lipinski; Y Amigues; M Blasi; T E Broad; C Cherbonnel; G J Cho; S Corley; P Daftari; D R Delattre; S Dileanis; J M Flynn; D Grattapaglia; A Guthrie; C Harper; P L Karttunen; H Kimura; G M Lewis; M Longeri; J-C Meriaux; M Morita; R C Morrin-O'donnell; T Niini; N C Pedersen; G Perrotta; M Polli; S Rittler; R Schubbert; M G Strillacci; H Van Haeringen; W Van Haeringen; L A Lyons
Journal:  Anim Genet       Date:  2007-08       Impact factor: 3.169

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  9 in total

1.  A novel CYP27B1 mutation causes a feline vitamin D-dependent rickets type IA.

Authors:  Robert A Grahn; Melanie R Ellis; Jennifer C Grahn; Leslie A Lyons
Journal:  J Feline Med Surg       Date:  2012-05-02       Impact factor: 2.015

2.  Feline mitochondrial DNA sampling for forensic analysis: when enough is enough!

Authors:  Robert A Grahn; Hasan Alhaddad; Paulo C Alves; Ettore Randi; Nashwa E Waly; Leslie A Lyons
Journal:  Forensic Sci Int Genet       Date:  2014-11-29       Impact factor: 4.882

Review 3.  Genetic testing in domestic cats.

Authors:  Leslie A Lyons
Journal:  Mol Cell Probes       Date:  2012-04-21       Impact factor: 2.365

4.  Acceptance of domestic cat mitochondrial DNA in a criminal proceeding.

Authors:  Leslie A Lyons; Robert A Grahn; Teri J Kun; Linda R Netzel; Elizabeth E Wictum; Joy L Halverson
Journal:  Forensic Sci Int Genet       Date:  2014-07-15       Impact factor: 4.882

5.  Cats of the Pharaohs: Genetic Comparison of Egyptian Cat Mummies to their Feline Contemporaries.

Authors:  Jennifer D Kurushima; Salima Ikram; Joan Knudsen; Edward Bleiberg; Robert A Grahn; Leslie A Lyons
Journal:  J Archaeol Sci       Date:  2012-05-19       Impact factor: 3.216

6.  Genetic and biological characterization of feline foamy virus isolated from a leopard cat (Prionailurus bengalensis) in Vietnam.

Authors:  Aoi Sumiyoshi; Koichi Kitao; Takayuki Miyazawa
Journal:  J Vet Med Sci       Date:  2021-12-09       Impact factor: 1.267

7.  Erythrocyte pyruvate kinase deficiency mutation identified in multiple breeds of domestic cats.

Authors:  Robert A Grahn; Jennifer C Grahn; Maria Ct Penedo; Chris R Helps; Leslie A Lyons
Journal:  BMC Vet Res       Date:  2012-10-30       Impact factor: 2.741

8.  SNP Miniplexes for Individual Identification of Random-Bred Domestic Cats.

Authors:  Ashley Brooks; Erica K Creighton; Barbara Gandolfi; Razib Khan; Robert A Grahn; Leslie A Lyons
Journal:  J Forensic Sci       Date:  2016-01-06       Impact factor: 1.832

Review 9.  Feline Blood Groups: A Systematic Review of Phylogenetic and Geographical Origin.

Authors:  Alessandra Gavazza; Giacomo Rossi; Maria Teresa Antognoni; Matteo Cerquetella; Arianna Miglio; Sara Mangiaterra
Journal:  Animals (Basel)       Date:  2021-11-23       Impact factor: 2.752

  9 in total

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