Literature DB >> 15013160

Results of a collaborative study of the EDNAP group regarding mitochondrial DNA heteroplasmy and segregation in hair shafts.

G Tully1, S M Barritt, K Bender, E Brignon, C Capelli, N Dimo-Simonin, C Eichmann, C M Ernst, C Lambert, M V Lareu, B Ludes, B Mevag, W Parson, H Pfeiffer, A Salas, P M Schneider, E Staalstrom.   

Abstract

A collaborative exercise was carried out by the European DNA Profiling Group (EDNAP) in order to evaluate the distribution of mitochondrial DNA (mtDNA) heteroplasmy amongst the hairs of an individual who displays point heteroplasmy in blood and buccal cells. A second aim of the exercise was to study reproducibility of mtDNA sequencing of hairs between laboratories using differing chemistries, further to the first mtDNA reproducibility study carried out by the EDNAP group. Laboratories were asked to type 2 sections from each of 10 hairs, such that each hair was typed by at least two laboratories. Ten laboratories participated in the study, and a total of 55 hairs were typed. The results showed that the C/T point heteroplasmy observed in blood and buccal cells at position 16234 segregated differentially between hairs, such that some hairs showed only C, others only T and the remainder, C/T heteroplasmy at varying ratios. Additionally, differential segregation of heteroplasmic variants was confirmed in independent extracts at positions 16093 and the poly(C) tract at 302-309, whilst a complete A-G transition was confirmed at position 16129 in one hair. Heteroplasmy was observed at position 16195 on both strands of a single extract from one hair segment, but was not observed in the extracts from any other segment of the same hair. Similarly, heteroplasmy at position 16304 was observed on both strands of a single extract from one hair. Additional variants at positions 73, 249 and the HVII poly(C) region were reported by one laboratory; as these were not confirmed in independent extracts, the possibility of contamination cannot be excluded. Additionally, the electrophoresis and detection equipment used by this laboratory was different to those of the other laboratories, and the discrepancies at position 249 and the HVII poly(C) region appear to be due to reading errors that may be associated with this technology. The results, and their implications for forensic mtDNA typing, are discussed in the light of the biology of hair formation.

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Year:  2004        PMID: 15013160     DOI: 10.1016/S0379-0738(03)00181-6

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  12 in total

1.  Feline non-repetitive mitochondrial DNA control region database for forensic evidence.

Authors:  R A Grahn; J D Kurushima; N C Billings; J C Grahn; J L Halverson; E Hammer; C K Ho; T J Kun; J K Levy; M J Lipinski; J M Mwenda; H Ozpinar; R K Schuster; S J Shoorijeh; C R Tarditi; N E Waly; E J Wictum; L A Lyons
Journal:  Forensic Sci Int Genet       Date:  2010-02-25       Impact factor: 4.882

2.  Length heteroplasmy of the polyC-polyT-polyC stretch in the dog mtDNA control region.

Authors:  Sophie Verscheure; Thierry Backeljau; Stijn Desmyter
Journal:  Int J Legal Med       Date:  2014-11-14       Impact factor: 2.686

3.  No relationship found between point heteroplasmy in mitochondrial DNA control region and age range, sex and haplogroup in human hairs.

Authors:  Maria Angélica de Camargo; Greiciane G Paneto; Aline C O de Mello; Joyce A Martins; William Barcellos; Regina M B Cicarelli
Journal:  Mol Biol Rep       Date:  2010-06-20       Impact factor: 2.316

4.  Mitochondrial DNA control region sequences in Koreans: identification of useful variable sites and phylogenetic analysis for mtDNA data quality control.

Authors:  Hwan Young Lee; Ji-Eun Yoo; Myung Jin Park; Ukhee Chung; Kyoung-Jin Shin
Journal:  Int J Legal Med       Date:  2005-09-22       Impact factor: 2.686

5.  Single lymphocytes from two healthy individuals with mitochondrial point heteroplasmy are mainly homoplasmic.

Authors:  Sabine Lutz-Bonengel; Timo Sänger; Walther Parson; Helena Müller; Joachim W Ellwart; Marie Follo; Bernhard Bonengel; Harald Niederstätter; Marielle Heinrich; Ulrike Schmidt
Journal:  Int J Legal Med       Date:  2007-10-06       Impact factor: 2.686

6.  DNA reviews: hair.

Authors:  E A M Graham
Journal:  Forensic Sci Med Pathol       Date:  2007-10-02       Impact factor: 2.007

7.  Inspecting close maternal relatedness: Towards better mtDNA population samples in forensic databases.

Authors:  Martin Bodner; Jodi A Irwin; Michael D Coble; Walther Parson
Journal:  Forensic Sci Int Genet       Date:  2010-11-09       Impact factor: 4.882

8.  A critical reassessment of the role of mitochondria in tumorigenesis.

Authors:  Antonio Salas; Yong-Gang Yao; Vincent Macaulay; Ana Vega; Angel Carracedo; Hans-Jürgen Bandelt
Journal:  PLoS Med       Date:  2005-10-04       Impact factor: 11.069

Review 9.  Mitochondrial DNA heteroplasmy in the emerging field of massively parallel sequencing.

Authors:  Rebecca S Just; Jodi A Irwin; Walther Parson
Journal:  Forensic Sci Int Genet       Date:  2015-05-06       Impact factor: 4.882

10.  High mitochondrial DNA stability in B-cell chronic lymphocytic leukemia.

Authors:  María Cerezo; Hans-Jürgen Bandelt; Idoia Martín-Guerrero; Maite Ardanaz; Ana Vega; Angel Carracedo; Africa García-Orad; Antonio Salas
Journal:  PLoS One       Date:  2009-11-18       Impact factor: 3.240

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