Literature DB >> 20452937

Selectivity of the NF-{kappa}B response.

Ranjan Sen1, Stephen T Smale.   

Abstract

NF-kappaB is activated by many stimuli and NF-kappaB binding sites have been identified in a wide variety of genes. Yet, NF-kappaB-dependent gene expression must be stimulus- and cell-type-specific. In others words, the cellular response to different NF-kappaB activating stimuli, such as TNFalpha, IL-1, and LPS, must be different; and the response of different cell types, such as lymphocytes, fibroblasts, or epithelial cells, to the same NF-kappaB-inducing stimulus must also be different. Finally, kinetics of gene expression must be accounted for, so that all NF-kappaB-dependent genes are not activated simultaneously even if cell type and stimulus are constant. Here, we explore the mechanistic framework in which such regulatory aspects of NF-kappaB-dependent gene expression have been analyzed because they are likely to form the basis for physiological responses.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 20452937      PMCID: PMC2845200          DOI: 10.1101/cshperspect.a000257

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  57 in total

1.  c-Rel-dependent priming of naive T cells by inflammatory cytokines.

Authors:  Daliya Banerjee; Hsiou-Chi Liou; Ranjan Sen
Journal:  Immunity       Date:  2005-10       Impact factor: 31.745

Review 2.  Interactions of NF-kappaB with chromatin: the art of being at the right place at the right time.

Authors:  Gioacchino Natoli; Simona Saccani; Daniela Bosisio; Ivan Marazzi
Journal:  Nat Immunol       Date:  2005-05       Impact factor: 25.606

3.  IKKalpha limits macrophage NF-kappaB activation and contributes to the resolution of inflammation.

Authors:  Toby Lawrence; Magali Bebien; George Y Liu; Victor Nizet; Michael Karin
Journal:  Nature       Date:  2005-04-28       Impact factor: 49.962

4.  Selective and antagonistic functions of SWI/SNF and Mi-2beta nucleosome remodeling complexes during an inflammatory response.

Authors:  Vladimir R Ramirez-Carrozzi; Aaron A Nazarian; Caiyi C Li; Sarah L Gore; Rupa Sridharan; Anthony N Imbalzano; Stephen T Smale
Journal:  Genes Dev       Date:  2006-02-01       Impact factor: 11.361

5.  Impaired on/off regulation of TNF biosynthesis in mice lacking TNF AU-rich elements: implications for joint and gut-associated immunopathologies.

Authors:  D Kontoyiannis; M Pasparakis; T T Pizarro; F Cominelli; G Kollias
Journal:  Immunity       Date:  1999-03       Impact factor: 31.745

6.  Mitogen-activated protein kinase-activated protein kinase 2 regulates tumor necrosis factor mRNA stability and translation mainly by altering tristetraprolin expression, stability, and binding to adenine/uridine-rich element.

Authors:  Edward Hitti; Tatiana Iakovleva; Matthew Brook; Stefanie Deppenmeier; Achim D Gruber; Danuta Radzioch; Andrew R Clark; Perry J Blackshear; Alexey Kotlyarov; Matthias Gaestel
Journal:  Mol Cell Biol       Date:  2006-03       Impact factor: 4.272

7.  Structural analysis, expression, and chromosomal localization of the mouse ikba gene.

Authors:  R A Rupec; D Poujol; J Grosgeorge; G F Carle; A Livolsi; J F Peyron; R M Schmid; P A Baeuerle; G Messer
Journal:  Immunogenetics       Date:  1999-05       Impact factor: 2.846

8.  Stimulus specificity of gene expression programs determined by temporal control of IKK activity.

Authors:  Shannon L Werner; Derren Barken; Alexander Hoffmann
Journal:  Science       Date:  2005-09-16       Impact factor: 47.728

9.  A c-Rel subdomain responsible for enhanced DNA-binding affinity and selective gene activation.

Authors:  Shomyseh Sanjabi; Kevin J Williams; Simona Saccani; Liang Zhou; Alexander Hoffmann; Gourisankar Ghosh; Steve Gerondakis; Gioacchino Natoli; Stephen T Smale
Journal:  Genes Dev       Date:  2005-09-15       Impact factor: 11.361

10.  NF-kappaB p50 promotes HIV latency through HDAC recruitment and repression of transcriptional initiation.

Authors:  Samuel A Williams; Lin-Feng Chen; Hakju Kwon; Carmen M Ruiz-Jarabo; Eric Verdin; Warner C Greene
Journal:  EMBO J       Date:  2005-12-01       Impact factor: 11.598

View more
  62 in total

1.  Regulation and function of nuclear IκBα in inflammation and cancer.

Authors:  Ivana Vancurova; Ales Vancura
Journal:  Am J Clin Exp Immunol       Date:  2012-05-25

2.  Inhibiting IκBβ-NFκB signaling attenuates the expression of select pro-inflammatory genes.

Authors:  Sarah McKenna; Clyde J Wright
Journal:  J Cell Sci       Date:  2015-04-23       Impact factor: 5.285

3.  NF-κB Activation Promotes Alphavirus Replication in Mature Neurons.

Authors:  Jane X Yeh; Eunhye Park; Kimberly L W Schultz; Diane E Griffin
Journal:  J Virol       Date:  2019-11-26       Impact factor: 5.103

Review 4.  Long non-coding RNAs (lncRNAs) and their transcriptional control of inflammatory responses.

Authors:  Nicholas W Mathy; Xian-Ming Chen
Journal:  J Biol Chem       Date:  2017-06-14       Impact factor: 5.157

5.  Molecular mechanisms of biogenesis of apoptotic exosome-like vesicles and their roles as damage-associated molecular patterns.

Authors:  Soo Jeong Park; Jeong Mi Kim; Jihyo Kim; Jaehark Hur; Sun Park; Kyongmin Kim; Ho-Joon Shin; Yong-Joon Chwae
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-21       Impact factor: 11.205

6.  Complex role of SIRT6 in NF-κB pathway regulation.

Authors:  Irene Santos-Barriopedro; Alejandro Vaquero
Journal:  Mol Cell Oncol       Date:  2018-05-24

Review 7.  Checks and balances: The glucocorticoid receptor and NFĸB in good times and bad.

Authors:  Mandakh Bekhbat; Sydney A Rowson; Gretchen N Neigh
Journal:  Front Neuroendocrinol       Date:  2017-05-11       Impact factor: 8.606

8.  Identification of an N-terminal truncation of the NF-κB p65 subunit that specifically modulates ribosomal protein S3-dependent NF-κB gene expression.

Authors:  Eric M Wier; Jordan Neighoff; Xin Sun; Kai Fu; Fengyi Wan
Journal:  J Biol Chem       Date:  2012-10-31       Impact factor: 5.157

9.  The NF-κB inhibitory proteins IκBα and IκBβ mediate disparate responses to inflammation in fetal pulmonary endothelial cells.

Authors:  Jen-Ruey Tang; Katherine A Michaelis; Eva Nozik-Grayck; Gregory J Seedorf; Marlena Hartman-Filson; Steven H Abman; Clyde J Wright
Journal:  J Immunol       Date:  2013-02-15       Impact factor: 5.422

10.  CpG-ODN-mediated TLR9 innate immune signalling and calcium dyshomeostasis converge on the NFκB inhibitory protein IκBβ to drive IL1α and IL1β expression.

Authors:  Robyn De Dios; Leanna Nguyen; Sankar Ghosh; Sarah McKenna; Clyde J Wright
Journal:  Immunology       Date:  2020-03-18       Impact factor: 7.397

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.