Literature DB >> 20446073

Deorphanization of novel peptides and their receptors.

Akihiko Ozawa1, Iris Lindberg, Bryan Roth, Wesley K Kroeze.   

Abstract

Peptide hormones and neuropeptides play important roles in endocrine and neural signaling, often using G protein-coupled receptor (GPCR)-mediated signaling pathways. However, the rate of novel peptide discovery has slowed dramatically in recent years. Genomic sequencing efforts have yielded a large number of cDNA sequences that potentially encode novel candidate peptide precursors, as well as hundreds of orphan GPCRs with no known cognate ligands. The complexity of peptide signaling is further highlighted by the requirement for specific posttranslational processing steps, and these must be accomplished in vitro prior to testing newly discovered peptide precursor candidates in receptor assays. In this review, we present historic as well as current approaches to peptide discovery and GPCR deorphanization. We conclude that parallel and combinatorial discovery methods are likely to represent the most fruitful avenues for both peptide discovery as well as for matching the remaining GPCRs with their peptide ligands.

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Year:  2010        PMID: 20446073      PMCID: PMC2895435          DOI: 10.1208/s12248-010-9198-9

Source DB:  PubMed          Journal:  AAPS J        ISSN: 1550-7416            Impact factor:   4.009


  89 in total

1.  Lipid G protein-coupled receptor ligand identification using beta-arrestin PathHunter assay.

Authors:  Hong Yin; Alan Chu; Wei Li; Bin Wang; Fabiola Shelton; Francella Otero; Deborah G Nguyen; Jeremy S Caldwell; Yu Alice Chen
Journal:  J Biol Chem       Date:  2009-03-13       Impact factor: 5.157

2.  Snapshot peptidomics of the regulated secretory pathway.

Authors:  Kazuki Sasaki; Yoshinori Satomi; Toshifumi Takao; Naoto Minamino
Journal:  Mol Cell Proteomics       Date:  2009-03-31       Impact factor: 5.911

3.  Establishment of a chimeric reporting system for the universal detection and high-throughput screening of G protein-coupled receptors.

Authors:  Chun-Jen Wang; Shih-Han Hsu; Wei-Ting Hung; Ching-Wei Luo
Journal:  Biosens Bioelectron       Date:  2008-12-07       Impact factor: 10.618

4.  Detection of G protein-coupled receptor-mediated cellular response involved in cytoskeletal rearrangement using surface plasmon resonance.

Authors:  Kexin Chen; Hideru Obinata; Takashi Izumi
Journal:  Biosens Bioelectron       Date:  2009-12-16       Impact factor: 10.618

5.  Purification and enzymatic characterization of recombinant prohormone convertase 2: stabilization of activity by 21 kDa 7B2.

Authors:  N S Lamango; X Zhu; I Lindberg
Journal:  Arch Biochem Biophys       Date:  1996-06-15       Impact factor: 4.013

6.  Predicting new molecular targets for known drugs.

Authors:  Michael J Keiser; Vincent Setola; John J Irwin; Christian Laggner; Atheir I Abbas; Sandra J Hufeisen; Niels H Jensen; Michael B Kuijer; Roberto C Matos; Thuy B Tran; Ryan Whaley; Richard A Glennon; Jérôme Hert; Kelan L H Thomas; Douglas D Edwards; Brian K Shoichet; Bryan L Roth
Journal:  Nature       Date:  2009-11-01       Impact factor: 49.962

7.  G protein-coupled receptor mediated trimethylamine sensing.

Authors:  Anke Suska; Ana B Ibáñez; Ingemar Lundström; Anna Berghard
Journal:  Biosens Bioelectron       Date:  2009-08-15       Impact factor: 10.618

8.  Agonists of the orphan human G2A receptor identified from inducible G2A expression and beta-lactamase reporter screen.

Authors:  Mark Bercher; Bonnie Hanson; Carlo van Staden; Kebin Wu; Gordon Y Ng; Paul H Lee
Journal:  Assay Drug Dev Technol       Date:  2009-04       Impact factor: 1.738

9.  Structural elements that direct specific processing of different mammalian subtilisin-like prohormone convertases.

Authors:  A Zhou; L Paquet; R E Mains
Journal:  J Biol Chem       Date:  1995-09-15       Impact factor: 5.157

10.  Pharmacological characterization of a selective agonist for bombesin receptor subtype-3.

Authors:  Li Zhang; Hans-Peter Nothacker; Zhiwei Wang; Laura M Bohn; Olivier Civelli
Journal:  Biochem Biophys Res Commun       Date:  2009-07-04       Impact factor: 3.575

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  13 in total

Review 1.  Orphan G protein-coupled receptors (GPCRs): biological functions and potential drug targets.

Authors:  Xiao-long Tang; Ying Wang; Da-li Li; Jian Luo; Ming-yao Liu
Journal:  Acta Pharmacol Sin       Date:  2012-02-27       Impact factor: 6.150

Review 2.  Fishing for the hidden peptidome in health and disease (drug abuse).

Authors:  Lloyd D Fricker; Jonathan V Sweedler
Journal:  AAPS J       Date:  2010-09-18       Impact factor: 4.009

Review 3.  Novel neuropeptides as ligands of orphan G protein-coupled receptors.

Authors:  Yan Zhang; Zhiwei Wang; Gregory Scott Parks; Olivier Civelli
Journal:  Curr Pharm Des       Date:  2011       Impact factor: 3.116

Review 4.  Molecular Imaging and Contrast Agent Database (MICAD): evolution and progress.

Authors:  Arvind Chopra; Liang Shan; W C Eckelman; Kam Leung; Martin Latterner; Stephen H Bryant; Anne Menkens
Journal:  Mol Imaging Biol       Date:  2012-02       Impact factor: 3.488

Review 5.  G protein-coupled receptor deorphanizations.

Authors:  Olivier Civelli; Rainer K Reinscheid; Yan Zhang; Zhiwei Wang; Robert Fredriksson; Helgi B Schiöth
Journal:  Annu Rev Pharmacol Toxicol       Date:  2012-09-28       Impact factor: 13.820

6.  Discovery of endogenous inverse agonists for G protein-coupled receptor 6.

Authors:  Sarah H Shrader; Zhao-Hui Song
Journal:  Biochem Biophys Res Commun       Date:  2019-12-07       Impact factor: 3.575

Review 7.  G Protein-Coupled Receptor (GPCR) Expression in Native Cells: "Novel" endoGPCRs as Physiologic Regulators and Therapeutic Targets.

Authors:  Paul A Insel; Andrea Wilderman; Alexander C Zambon; Aaron N Snead; Fiona Murray; Nakon Aroonsakool; Daniel S McDonald; Shu Zhou; Thalia McCann; Lingzhi Zhang; Krishna Sriram; Amy M Chinn; Alexander V Michkov; Rebecca M Lynch; Aaron C Overland; Ross Corriden
Journal:  Mol Pharmacol       Date:  2015-03-03       Impact factor: 4.436

Review 8.  Investigating endogenous peptides and peptidases using peptidomics.

Authors:  Arthur D Tinoco; Alan Saghatelian
Journal:  Biochemistry       Date:  2011-08-15       Impact factor: 3.162

9.  Bioinformatics for Prohormone and Neuropeptide Discovery.

Authors:  Bruce R Southey; Elena V Romanova; Sandra L Rodriguez-Zas; Jonathan V Sweedler
Journal:  Methods Mol Biol       Date:  2018

Review 10.  A chemogenomics based approach for deorphanization of testicular receptor 4: An orphan receptor of nuclear receptor superfamily.

Authors:  Savita Deshmukh; Shivakumar B Madagi
Journal:  J Nat Sci Biol Med       Date:  2013-07
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