Literature DB >> 20428927

The NMR structure of the autophagy-related protein Atg8.

Hiroyuki Kumeta1, Masahiro Watanabe, Hitoshi Nakatogawa, Masaya Yamaguchi, Kenji Ogura, Wakana Adachi, Yuko Fujioka, Nobuo N Noda, Yoshinori Ohsumi, Fuyuhiko Inagaki.   

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Year:  2010        PMID： 20428927     DOI： 10.1007/s10858-010-9420-1

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN： 0925-2738            Impact factor:   2.835


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  18 in total

1.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

2.  The crystal structure of Atg3, an autophagy-related ubiquitin carrier protein (E2) enzyme that mediates Atg8 lipidation.

Authors:  Yuya Yamada; Nobuo N Suzuki; Takao Hanada; Yoshinobu Ichimura; Hiroyuki Kumeta; Yuko Fujioka; Yoshinori Ohsumi; Fuyuhiko Inagaki
Journal:  J Biol Chem       Date:  2007-01-16       Impact factor: 5.157

Review 3.  Autophagy: process and function.

Authors:  Noboru Mizushima
Journal:  Genes Dev       Date:  2007-11-15       Impact factor: 11.361

Review 4.  ATG systems from the protein structural point of view.

Authors:  Nobuo N Noda; Yoshinori Ohsumi; Fuyuhiko Inagaki
Journal:  Chem Rev       Date:  2009-04       Impact factor: 60.622

5.  Crystal structure of the GABA(A)-receptor-associated protein, GABARAP.

Authors:  Vassiliy N Bavro; Maria Sola; Andreas Bracher; Matthias Kneussel; Heinrich Betz; Winfried Weissenhorn
Journal:  EMBO Rep       Date:  2002-01-29       Impact factor: 8.807

6.  Structure of GATE-16, membrane transport modulator and mammalian ortholog of autophagocytosis factor Aut7p.

Authors:  Y Paz; Z Elazar; D Fass
Journal:  J Biol Chem       Date:  2000-08-18       Impact factor: 5.157

7.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

8.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

9.  Novel system for monitoring autophagy in the yeast Saccharomyces cerevisiae.

Authors:  T Noda; A Matsuura; Y Wada; Y Ohsumi
Journal:  Biochem Biophys Res Commun       Date:  1995-05-05       Impact factor: 3.575

10.  The reversible modification regulates the membrane-binding state of Apg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway.

Authors:  T Kirisako; Y Ichimura; H Okada; Y Kabeya; N Mizushima; T Yoshimori; M Ohsumi; T Takao; T Noda; Y Ohsumi
Journal:  J Cell Biol       Date:  2000-10-16       Impact factor: 10.539
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  21 in total

Review 1.  The expanding universe of ubiquitin and ubiquitin-like modifiers.

Authors:  Richard D Vierstra
Journal:  Plant Physiol       Date:  2012-06-12       Impact factor: 8.340

2.  Time-resolved FRET and NMR analyses reveal selective binding of peptides containing the LC3-interacting region to ATG8 family proteins.

Authors:  Jennifer M Atkinson; Yansheng Ye; Melat T Gebru; Qiang Liu; Shouhao Zhou; Megan M Young; Yoshinori Takahashi; Qing Lin; Fang Tian; Hong-Gang Wang
Journal:  J Biol Chem       Date:  2019-07-30       Impact factor: 5.157

3.  Autophagic proteins ATG4 and ATG8 in wheat: Structural characteristics and their role under stress conditions.

Authors:  V V Ryabovol; F V Minibayeva
Journal:  Dokl Biochem Biophys       Date:  2014-11-04       Impact factor: 0.788

4.  A cancer associated somatic mutation in LC3B attenuates its binding to E1-like ATG7 protein and subsequent lipidation.

Authors:  Gal Chaim Nuta; Yuval Gilad; Moran Gershoni; Arielle Sznajderman; Tomer Schlesinger; Shani Bialik; Miriam Eisenstein; Shmuel Pietrokovski; Adi Kimchi
Journal:  Autophagy       Date:  2018-10-08       Impact factor: 16.016

5.  Structural biology of the macroautophagy machinery.

Authors:  Leon H Chew; Calvin K Yip
Journal:  Front Biol (Beijing)       Date:  2014-02-01

6.  Membrane perturbation by lipidated Atg8 underlies autophagosome biogenesis.

Authors:  Tatsuro Maruyama; Jahangir Md Alam; Tomoyuki Fukuda; Shun Kageyama; Hiromi Kirisako; Yuki Ishii; Ichio Shimada; Yoshinori Ohsumi; Masaaki Komatsu; Tomotake Kanki; Hitoshi Nakatogawa; Nobuo N Noda
Journal:  Nat Struct Mol Biol       Date:  2021-07-08       Impact factor: 15.369

7.  Autophagy-related protein 8 (Atg8) family interacting motif in Atg3 mediates the Atg3-Atg8 interaction and is crucial for the cytoplasm-to-vacuole targeting pathway.

Authors:  Masaya Yamaguchi; Nobuo N Noda; Hitoshi Nakatogawa; Hiroyuki Kumeta; Yoshinori Ohsumi; Fuyuhiko Inagaki
Journal:  J Biol Chem       Date:  2010-07-08       Impact factor: 5.157

Review 8.  Autophagy in C. elegans development.

Authors:  Nicholas J Palmisano; Alicia Meléndez
Journal:  Dev Biol       Date:  2018-04-27       Impact factor: 3.582

9.  A PCR analysis of the ubiquitin-like conjugation systems in macroautophagy.

Authors:  Andy Bass; Dean Sauer; Daniel J Klionsky
Journal:  Autophagy       Date:  2011-12       Impact factor: 16.016

10.  Structural characterization and inhibition of the Plasmodium Atg8-Atg3 interaction.

Authors:  Adelaide U P Hain; Ryan R Weltzer; Holly Hammond; Bamini Jayabalasingham; Rhoel R Dinglasan; David R M Graham; David R Colquhoun; Isabelle Coppens; Jürgen Bosch
Journal:  J Struct Biol       Date:  2012-09-13       Impact factor: 2.867
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